Gene Mnod_0359 details

Gene Information

• Locus tag: Mnod_0359
• Symbol: rpsD
• ID: 7302095
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium nodulans ORS 2060
• Kingdom: Bacteria
• Replicon accession: NC_011894
• Strand: +
• Start bp: 402995
• End bp: 403612
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643598139
• Product: 30S ribosomal protein S4
• Protein accession: YP_002495705
• Protein GI: 220920404
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.193969
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAAAC GCATCCAGGC GAAGCACAAG CTCGATCGCC GCATGGGCCA GAACATCTGG 
GGCCGCCCGA AGAGCCCCGT CAACCGCCGC GAATACGGCC CCGGACAGCA CGGACAGCGC 
CGCAAGGGCA AGCTGTCCGA CTTCGGCACG CAGCTGCGCG CGAAGCAGAA GCTGAAGGGC 
TACTACGCCA ACATCACCGA GAAGCAGTTC CGCCGCTACT ACGCCGAGGC GATCCGCCTG 
CGCGGCGATT CCGGCGAGAA CCTGATCGGC CTCTTGGAGC GCCGCCTGGA CGCCGTCATC 
TACCGGGCGA AGTTCGTGGC GACCCCCTTC GCGGCGCGCC AGTTCGTGAA CCACGGCCAC 
ATCAAGGTGA ACGGCCAGCG GGTCAATATC CCGAGCTTCC TCGTCAAGCC GGGCGACGTG 
ATCGAGGTCA AGGAATCCTC CAAGCAGCTC GAGATCGTGG TCGTGGCCTC CCAGCTCGCC 
GAGCGCGACG TGCCGGACTA CATCGAGGTC GATCACGGCA AGATGACCGC GCGCTTCACC 
CGCGTGCCGA CCCTCTCCGA GGTGCCCTAT CCGGTGCACA TGGAGCCGAA CCAGGTCATC 
GAGTTCTATT CGCGCTGA 

 

Protein sequence

MSKRIQAKHK LDRRMGQNIW GRPKSPVNRR EYGPGQHGQR RKGKLSDFGT QLRAKQKLKG 
YYANITEKQF RRYYAEAIRL RGDSGENLIG LLERRLDAVI YRAKFVATPF AARQFVNHGH 
IKVNGQRVNI PSFLVKPGDV IEVKESSKQL EIVVVASQLA ERDVPDYIEV DHGKMTARFT 
RVPTLSEVPY PVHMEPNQVI EFYSR