Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_0270 |
Symbol | |
ID | 7308181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 300357 |
End bp | 303236 |
Gene Length | 2880 bp |
Protein Length | 959 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643598051 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC-like protein |
Protein accession | YP_002495617 |
Protein GI | 220920316 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0511336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCGCCACG CCTCCCTTGC CCTCGCCCTC CTCGTCGCCC TCGCGGGGGC GCTCCTGCCG TCCGCGGCGC GCGCGCTGGA GGCGGTGCGG GTCGGGCTCG ACGCCCAGGC GATCGACCTC ACGCCCGCCA TCGAGCGCTA CCGCTCCGAC GGCGACCTGA TCCAGATCTC GACGGCGCCC GGCAAGGACG GCATCGTCCG GCGCATCGCC GTGAAGGCGC GCGAGACCGG GGCGCGGCCG GACTGGATCG TCTTCGCGCT CACCAACGAC ACCGACGAGC AGATCGACCG GCTTCTCGTC GCGCCGCATT TCCGTCTCGT CGGCTCGGGC ATCATCTGGC CGGATCTCGG CGGCTCGCGC ATCGCGGCGA TCACCGCGAG CCAGGGCATC CGGCCCGAGC GCGACGAGAG CCCGGATGCG GACCAGTTCA CCGTCACGCT CGATCCCGGC ACGACCGTCA CCTTCGTGGC GGAGCTGCGC ACCCCCAACG TGCCGCAGCT CTACCTCTGG GACCAGGACG CCTACCGCAA GAAGGCAACC GGGCTCACCC TCTACAAGGG CATCATCATC GGCATCGCGG GGCTCCTCGC GCTCTTCCTC ACCGTCGTGT TCGTGGTGAA GGGCGCGATC ATCTTTCCCG CCGCGGCGGC GCTGGCCTGG TCGGTGCTGG CCTATACCTG CATCGATTTC GGCTTCTTCC AGCGGATCTT CCCGGTCACG GAGGCGGCCG AGCGGGTCTA CCGCGCCTCC GCGGAGGCGG TGCTCGGCGC GACGCTGCTC GTCTTCCTGT TCGCCTACCT CAACCTCGCC CGCTGGCACG TGCGCTACAG CCACGTGGCG CTCCTGTGGC TGATCTTCCT CGCGGGCCTC GTGGCACTCG CCGTCGTCGA CCCGCCGGTG GCGGCGGGCG TGGCGCGCAT CTCGATCGCG ACCGTGGCGG GCGTCGGCCT CCTCCTCGTC GTGTATCTGG CAGCCCATAA CGGCTACGAC CGGGCGATCC TGCTGATCCC GACCTGGCTT CTCCTGACCG CCTGGGTGGT GGCGGCGGGT TTCGCGATCA CCGGGCAGCT GCGCAACGAC CTCGTCCAGC CGGCGCTGAT CGGCGGCCTC GTGCTCATCG TGATGCTGAT CGGCTTCACG GTGCTCCAGC ATGCCTTCGC GGGCGGGGGC ATCGGCACGG CCGTGGTCTC GGACACCGAG CGGCGGGCGC TGGCGCTGAC GGGTGCGGGC GACGTGGTGT TCGACTGGGA CGTGCCCGGC GACCGGGTCT TCGCCGGTCC GGAGATCGAG AGCCAGCTCG GCCTCAAGCG CGGCGCCCTC GAAGGACCGG CCGCGAACTG GCTGGCGCTG CTCCACCCCT TCGACGTCGA CCGCTACTCG GCGGCCCTCG ACACGGTGAT CGAGGAGCGC CGCGGGCGCA TCTGCCAGGA TTTCCGCCTG CGTGCCGCCG CCGGCCCTTA TTACTGGTTC CGGCTCAAGG CCCGGCCGGT GATCGGGGCG GATGGCGAGG TGATCCGCAT CGTCGGCACC ATCGCGGACG TGACGGAGGT GAAGATCGCC GAGGAGCGCC TGCTCCACGA TGCGGTGCAC GACAACCTCA CGGGCCTGCC GAACCGCGAA TTGTTCAACG ACCGGCTCGA CGCCGCCCTG ACGCTCGCGG CGCAGGATCC GCGGCTCAAG CCCACGGTCT TCGTCCTCGA TATCGACCGC TTCAAGCAGG TGAACGACGC GATCGGGCTC TCGGCGGGCG ATTCGATCCT GCTCACCCTG TCGCGCCGCC TCGGCCGGCT GCTGCGCCCG CAGGACACGC TGGCGCGGAT CGCCGGCGAC GAGCTCGCGG TGATCCTGGT CTCCGAGCGC GACCCCGACC GCATCATCGC CTTCGCGGAC ATGATCCGGC GCGCCATCAC CACGCCGATC ACCTACGCGG ACCGCGAGAT CTTCCTGACG CCCTCGATCG GGGTGGTGCT GCACGAGGCG GGCAGCAATC CGAAGCGCGA CCAGATCTTC AAGAATGCCG AGATCGCCAT GATCCAGGCC AAGCGCCAGG GCGGTGACCG GATCGAGGTC TACCGGCCGA CCATGCGCTC GGACCGCGGC GACCGGCTGA TGCTGGAGAG CGACCTGCGC CAGGCGCTCG AACGCAACGA GATCAAGGTG CTGTTCCAGC CGATCGTCCG GCTGGAGGAC CGCACGGTCG CGGGGTTCGA GGCGCTGTTG CGCTGGGACC ATCCCAAGCA CGGGCGCATC CCCCCCCAGA CCTTCATCCC GATCGCGGAG GAATCCGGCC TCATCGTCGA TCTCGGCGTC TTCGCGCTGG AGCGCACGGC GGCGGAGCTC GCCGCCTGGC AGCAGGCGCT GGTGGTCGAG CCGCCGCTCT TTGCCTCCGT CAACGTCTCC TCGCGCCAGC TCCTGCGCCA CGACCTCCTG CACGACGTGA AGACGGTGCT CGCCCGCACC GGCGTCGCCC CCGGGTCGCT CAAGCTCGAA CTCACCGAGA GCCTGGTGAT GGAGAACCCG GAATACGCCG CGCAGATGCT CGCCCGCATC GCCGAACTCG GCGCCGGCCT CTCCCTCGAC GATTTCGGCA CCGGCTACTC GGCGCTGGCC TATCTCCAGC GCTTCCCGTT CGACACGATC AAGATCGACC AATCCTTCGT GCGCCAGATG GCGAACGGCC GCTCGGTGAT CCTGCGCTCG ATCGTGCGGA TGGCGCAGGA GCTGGGGCTC GAGATCGTGG CCGAGGGTGC CGAGACCGAG GCGGATGCGC GGGCGCTGGC GGAGATCGGG TGCGATTACG CGCAGGGCTT CGCCTTCGGC GAGCCGATGT CGGTCCATCA GGCCCGCCAG CTCGTGGGAG CGGCGCCGGC CGCCGCGTGA
|
Protein sequence | MRHASLALAL LVALAGALLP SAARALEAVR VGLDAQAIDL TPAIERYRSD GDLIQISTAP GKDGIVRRIA VKARETGARP DWIVFALTND TDEQIDRLLV APHFRLVGSG IIWPDLGGSR IAAITASQGI RPERDESPDA DQFTVTLDPG TTVTFVAELR TPNVPQLYLW DQDAYRKKAT GLTLYKGIII GIAGLLALFL TVVFVVKGAI IFPAAAALAW SVLAYTCIDF GFFQRIFPVT EAAERVYRAS AEAVLGATLL VFLFAYLNLA RWHVRYSHVA LLWLIFLAGL VALAVVDPPV AAGVARISIA TVAGVGLLLV VYLAAHNGYD RAILLIPTWL LLTAWVVAAG FAITGQLRND LVQPALIGGL VLIVMLIGFT VLQHAFAGGG IGTAVVSDTE RRALALTGAG DVVFDWDVPG DRVFAGPEIE SQLGLKRGAL EGPAANWLAL LHPFDVDRYS AALDTVIEER RGRICQDFRL RAAAGPYYWF RLKARPVIGA DGEVIRIVGT IADVTEVKIA EERLLHDAVH DNLTGLPNRE LFNDRLDAAL TLAAQDPRLK PTVFVLDIDR FKQVNDAIGL SAGDSILLTL SRRLGRLLRP QDTLARIAGD ELAVILVSER DPDRIIAFAD MIRRAITTPI TYADREIFLT PSIGVVLHEA GSNPKRDQIF KNAEIAMIQA KRQGGDRIEV YRPTMRSDRG DRLMLESDLR QALERNEIKV LFQPIVRLED RTVAGFEALL RWDHPKHGRI PPQTFIPIAE ESGLIVDLGV FALERTAAEL AAWQQALVVE PPLFASVNVS SRQLLRHDLL HDVKTVLART GVAPGSLKLE LTESLVMENP EYAAQMLARI AELGAGLSLD DFGTGYSALA YLQRFPFDTI KIDQSFVRQM ANGRSVILRS IVRMAQELGL EIVAEGAETE ADARALAEIG CDYAQGFAFG EPMSVHQARQ LVGAAPAAA
|
| |