| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_0214 |
|---|
| Symbol | |
|---|
| ID | 7304540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 239290 |
|---|
| End bp | 240777 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643597996 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_002495562 |
|---|
| Protein GI | 220920261 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.308761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACCA CGGTGCTCAT CGTCGATGAC GATCCCGTGC AACGGCGCCT CGCGGAGGCG
ATGGTCCGGC GCCTCGGCTT CGAGGCGATC GTGGCGGAGG GCGGCGAGGC GGCGCTCGCT
TGCCTACGCG CCCCGGATGC GGGCATCGAC GTGGTGCTCC TCGACCTCGT GATGCCCGGC
GGCCTCGACG GCCTCGGCGT GCTCGCCGAG ATGCGCAGGA GCGCCATCGA CACGCCGGTG
ATCGTCCAGA CCGCGAACGG CTCGATCGAC GCCGTGGTCA CGGCGATGCG GGCCGGCGCC
ATCGATTTCG TGGTCAAGCC CGCGGGGGCC GAGCGCCTCC AGGTCTCGAT CAAGAACGCC
CTGCAGGTCG ACCAGCTGCA GGACGAGATC CGGCGCATGC GCCGCCGTGC CTCGGGGGCG
CTGACCTTCA AGGACCTGAC CTCGAAGAGC CCCGACATGG GCCGGATCAT CCGGCTCGCC
GAGCGGGCGG CGAAGTCGAA CATCCCGGTG CTGATCGAGG GCGAGTCCGG CGTCGGCAAG
GAAGTGCTGG CCCGCGCCAT CCAGGGCTCG GGCGAGCGGC GCGGCAAGCC CTTCGTCACC
GTCAATTGCG GCGCGATCCC CGACAACCTC GTCGAGTCGA CCCTGTTCGG GCACGAGAAG
GGCGCCTTCA CGGGCGCCAC GGAGCGCCAT GTCGGCAAGT TCGTGGAGGC GTCGGGCGGG
ACGCTGTTCC TCGACGAGAT CGGCGAATTG CCGCTCGATG CCCAGGTCAA GCTGCTCCGC
GCCCTCCAGG AGGGGGAGGT CGATCCGGTC GGCGGGCGCA AGAGCGTGCG GGTCGACATC
CGCCTGATCT CGGCCACCAA CCGCTCGCTC CTCGACCTCG TCAAGCAGGG CCGGTTCCGC
GAGGATCTCT ATTACCGGCT CAACGTCTTC CCGATGACCC TGCCCCCGCT GCGGGCGCGC
CGCGAGGACA TTCCCGACCT CGCCCGCTCC TTCTGCGCCC GCTTCGCGGC CGAGGAGGGC
AAGCGCGTGC GGGCCATCAC GCCGGAGGCG ATGGCGCTCA TCACCCGCTA CGACTGGCCC
GGCAACGTGC GCCAGCTCGA GAATGCGCTC TTCCGCGCCG TGGTGCTGGC GGATGGCGAC
GAGCTCACGG TGGCGGAGTT CCCGCAGATC GCCGCGCAGG TCGAGGGCTT CGACGTGCGC
ATTCCCGCAG CCCCCAGCCT GCCGGAGGCG GTCGCTGCCT CCGCCCCCTT ACGCGAGATC
GTCCGCGTCG AGGTGCGCGA TCCGCACGCC ATCTCGCTCG TGTCCGAGGA GAGCGGCGAG
ATGAAGACCA TGGAGGGACT GGAGGGCGAG ATCATCCGCT ACGCCCTGCA ATTCTACCGC
GGGAGGATGT CGGAAGTGTC CCGCCGCCTC GGCATCGGGC GCTCGACGCT CTACCGCAAG
CTCAAGGATC TCGGGATCGA CGAGGACAAG GCGGACGACG CCGCCTGA
|
|---|
| Protein sequence | MSTTVLIVDD DPVQRRLAEA MVRRLGFEAI VAEGGEAALA CLRAPDAGID VVLLDLVMPG
GLDGLGVLAE MRRSAIDTPV IVQTANGSID AVVTAMRAGA IDFVVKPAGA ERLQVSIKNA
LQVDQLQDEI RRMRRRASGA LTFKDLTSKS PDMGRIIRLA ERAAKSNIPV LIEGESGVGK
EVLARAIQGS GERRGKPFVT VNCGAIPDNL VESTLFGHEK GAFTGATERH VGKFVEASGG
TLFLDEIGEL PLDAQVKLLR ALQEGEVDPV GGRKSVRVDI RLISATNRSL LDLVKQGRFR
EDLYYRLNVF PMTLPPLRAR REDIPDLARS FCARFAAEEG KRVRAITPEA MALITRYDWP
GNVRQLENAL FRAVVLADGD ELTVAEFPQI AAQVEGFDVR IPAAPSLPEA VAASAPLREI
VRVEVRDPHA ISLVSEESGE MKTMEGLEGE IIRYALQFYR GRMSEVSRRL GIGRSTLYRK
LKDLGIDEDK ADDAA
|
|---|
| |