Gene Mnod_0213 details

Gene Information

• Locus tag: Mnod_0213
• ID: 7304539
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium nodulans ORS 2060
• Kingdom: Bacteria
• Replicon accession: NC_011894
• Strand: -
• Start bp: 237159
• End bp: 239009
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643597995
• Product: oligoendopeptidase, pepF/M3 family
• Protein accession: YP_002495561
• Protein GI: 220920260
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1164] Oligoendopeptidase F
• TIGRFAM ID: [TIGR02290] oligoendopeptidase, pepF/M3 family

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.227297
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGACCC GAGCCGCCGC GCCATCGGAA GCCCCCCAGA GCGCGGCCCA GGCCATGGCA 
CGCGCCGTCG ATCTCGGTCC GCTGCCCGAA TGGGACCTCT CGGATCTCTA TGCGGGCCTC 
GACGACCCCG CCTTCGCGCG CGATCTCGCC CGGGCCGAGG CCGAATGCCG GGCCTTCGCG 
GAGGCCTATC AGGGCAGGAT CGCCGCGCTC GCAGCCGGGG ACGGCGCCTC CGACCGCCTC 
GGGACGGCGG TCGCCGCCTA CGAGGCGCTG GAGGACCTGA TGGGCCGGCT CCTGTCCTTC 
GCGGGTCTGG TCTATTCGGG CGACACCACC GATCCGGCCC GCGCCAAGTT CTACGGCGAC 
ACGCAGGAGC GGCTCACCGC GGCGTCGAGC GACCTCCTGT TCTTCACCCT CGAACTCAAC 
CGCGTGCCCG ACGAGGTGCT CGACGCCGCA ACCGCGCTGC CGCCGCTCGC GCGCTACCGA 
CCCTGGATCG AGGACATCCG CCGCGAGAAG CCCCACCAGC TCAGCGACGA GCTGGAGCGG 
CTGCTCCTGG AGAAGTCGGT CACCGGGCGG GCCGCCTGGA ACCGCCTCTT CGACGAGACG 
GTCGCTTCCT TACGCTTTCC GGTGCGCGGC GAGTTGCTCA CCCTGGAGCC GACGCTCAAC 
AAGCTCCAGG ATGCGGACGA GGGCCTGCGC CGCGACGCCG CCGAGGCGCT GAGCGGCGTC 
TTCCGGGCGA ATCTGCGGCT CTTCACGCTC ATCACCAACA CGCTCGCCAA GGACAAGGAG 
ATCGCGGACC GCTGGCGCCG CTTCGGGGAC GTGGCGGATT CCCGCCACTT GGCCAACCGG 
GTCGAGCCGG AGGTGGTGGC GGCGCTCGTG GAGGCAGTGA CTGCCGCCTA TCCGCGCCTC 
TCCCACCGCT ACTACCGGCT GAAGGCGCGG TGGTTCGGCC GCGACAGCCT CGCCTATTGG 
GACCGCAACG CGCCGCTGCC GAAGGTGGAG CAGCGCACCA TCCCCTGGGC CGAGGCGCGC 
GAGACCGTGC TGTCGGCCTA CGGCGCCTTC TCGCCGCGCA TGGCGGAGAT CGCCCGCACC 
TTCTTCGACG GCGGCTGGAT CGACGCGCCG GTGCGGCCCG GCAAGGCGCC CGGCGCCTTC 
GCGCATCCGA CCGTGCCCTC TTCCCACCCC TACGTGCTGG TGAACTACCA GGGCAAGCCG 
CGGGACGTGA TGACGCTCGC CCATGAGCTC GGCCATGGCG TCCATCAGGT GCTCGCCGCC 
GGCAACGGGG CGCTGATGGC ACCGACGCCG CTGACGCTCG CCGAGACCGC GAGCGTCTTC 
GGCGAGATGC TGACCTTCCG CCGCGTGCTC GACGCCACGA CCGATCGCCG CCAGCGCCGG 
GCGCTCCTCG CCGCCAAGGT CGAGGACATG ATCAACACGG TGGTGCGGCA GATCGCCTTC 
TACGTCTTCG AGCGCGAGCT CCACCTCGCG CGCCGCGCGG GCGAGCTCAC CGCCGACCAG 
ATCTGCGCCC TCTGGATGTC CGTCCAGGCC GAGAGCCTCG GGCCGGCGAT CCGGCTGGAT 
GCGGGCTACG AGCCCTTCTG GGCCTATATC CCGCACTTCA TCCACTCGCC CTTCTACGTC 
TATGCCTACG CCTTCGGCGA CTGCCTCGTG AACTCGCTCT ACGGCGTGTA CCGGAACGCC 
GAGGAGGGGT TCGTCGACCG CTACTTCGCG CTCCTGTCGG CGGGCGGGAG CAAGCCCTAC 
GGCGAGCTCC TGGCCCCGTT CGGGCTCGAC GCCCGCGACC CGTCCTTCTG GCAGATCGGC 
CTGTCGATGA TCGAGGGCAT GATCGCGGAA CTCGAAGAGA TGGAGGCCTA A 

 

Protein sequence

MPTRAAAPSE APQSAAQAMA RAVDLGPLPE WDLSDLYAGL DDPAFARDLA RAEAECRAFA 
EAYQGRIAAL AAGDGASDRL GTAVAAYEAL EDLMGRLLSF AGLVYSGDTT DPARAKFYGD 
TQERLTAASS DLLFFTLELN RVPDEVLDAA TALPPLARYR PWIEDIRREK PHQLSDELER 
LLLEKSVTGR AAWNRLFDET VASLRFPVRG ELLTLEPTLN KLQDADEGLR RDAAEALSGV 
FRANLRLFTL ITNTLAKDKE IADRWRRFGD VADSRHLANR VEPEVVAALV EAVTAAYPRL 
SHRYYRLKAR WFGRDSLAYW DRNAPLPKVE QRTIPWAEAR ETVLSAYGAF SPRMAEIART 
FFDGGWIDAP VRPGKAPGAF AHPTVPSSHP YVLVNYQGKP RDVMTLAHEL GHGVHQVLAA 
GNGALMAPTP LTLAETASVF GEMLTFRRVL DATTDRRQRR ALLAAKVEDM INTVVRQIAF 
YVFERELHLA RRAGELTADQ ICALWMSVQA ESLGPAIRLD AGYEPFWAYI PHFIHSPFYV 
YAYAFGDCLV NSLYGVYRNA EEGFVDRYFA LLSAGGSKPY GELLAPFGLD ARDPSFWQIG 
LSMIEGMIAE LEEMEA