| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_0102 |
|---|
| Symbol | |
|---|
| ID | 7304337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 107549 |
|---|
| End bp | 108502 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643597879 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002495452 |
|---|
| Protein GI | 220920151 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0368205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCGG CGGCCGAGCG CGCGATCCGG TTGCTCGGTG CCGCGGCGGT GCCCCGCGCC
GTGCCCGGGC TCGCCGCGGA GGGGTGGCGC CAGCGCCGCC TCGCCTACCT GCAGGCGGCC
CCTCTGGCGC TGGTCTTCCT CGTCTTCTTC GTGGTGCCGC TCTCCCTCAC GCTCGTCGTC
AGCGTCTGGG AGTACAACGA GTACGAGATC ATCCCGGCCT TCACCCTGCA GAACTACGCC
GACATCTTCG ATGGCTGCTT CTCGGGCGGG GACCTCTGCA CCACCTTCCG GACCTATCTC
TCGACGCTGA AATTCTGCCT GCTGGCCTGG GCCTTCACGC TCGGCATCGG CTTCACGGTG
GCCTATTTCG TGGCCTTCCA CGTGCGGTCG AGCGCCATTC AGACGGTGCT GTTCCTTCTC
TGCACCATCC CGTTCTGGAC CTCGAACGTG ATCCGGATGA TCGCCTGGAT CCCACTCCTC
GGCCGCAACG GCCTCGTCAA CGATGCGCTG ATGTCGCTCG GCCTCACGGA CAGGCCGATC
GAGGGCCTGC TCTACTCGGA CTTCTCGGTC GTCCTGGCCT TCGTGCACCT CTACACCGTC
TTCATGATCG TCCCGATCTT CAACTCGATG ATGCGCATCG ACCCCGTGCT GATCGAGGCG
GCGCGGGATG CCGGCGCGAC GGGCTGGCAG ACGCTCTGGA GCGTGATCGT GCCGCTCTCC
AAGCCCGGCA TCGCCATCGG GTCGATCTTC GTGCTGACGC TGGCGATGGG CGACTTCGTC
ACGGTCGGCG TCATGGGCGG CCAGCAGATC GCCTCGGTCG GCAAGGTCAT CCAGGTGCAG
ATGTCCTACC TGCAGTTCCC GGCCGCCGCC GCCAATGCCG TGGTGCTGCT CGGTGCGGTG
ACGCTGGTGA TCGCCGGCCT CACCCGCCTC ATCGATCTGC GGCGGGAGCT CTGA
|
|---|
| Protein sequence | MSPAAERAIR LLGAAAVPRA VPGLAAEGWR QRRLAYLQAA PLALVFLVFF VVPLSLTLVV
SVWEYNEYEI IPAFTLQNYA DIFDGCFSGG DLCTTFRTYL STLKFCLLAW AFTLGIGFTV
AYFVAFHVRS SAIQTVLFLL CTIPFWTSNV IRMIAWIPLL GRNGLVNDAL MSLGLTDRPI
EGLLYSDFSV VLAFVHLYTV FMIVPIFNSM MRIDPVLIEA ARDAGATGWQ TLWSVIVPLS
KPGIAIGSIF VLTLAMGDFV TVGVMGGQQI ASVGKVIQVQ MSYLQFPAAA ANAVVLLGAV
TLVIAGLTRL IDLRREL
|
|---|
| |