Gene Mnod_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0054 
Symbol 
ID7306477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp60575 
End bp61591 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content67% 
IMG OID643597833 
Productputative periplasmic substrate-binding transmembrane protein 
Protein accessionYP_002495408 
Protein GI220920107 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.940543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGGAC AGAAATGGCT GAGGCTCGCC GCTGGCGCCG CGATCGCGCT CGGCCTCGCG 
ACGATGCCGC TGCGGGCCGA GGTCTCGGAG GTGCGCATCT CGAAGGGCTA CGGCATCCTC
TACCTGCCGC TCTTCGTCAT GCAGGAGAAG AAGTTCCTGG AGGCCCAGGC GGCCAAAGCC
GGCCTCGGGG ACGTGAAGGT GACCTGGCTC ACCCTCGACG GCGGCAACGT CATCAACGAC
GCCATGATCG CGGGCTCCCT CGACATCGCC GGGACCGGCG CGCCGGGCTT CCTCGCCCTC
TGGTCCAAGG GGCGCGGCAG CCCGAAGACC GAGGTGATCG GCGTCTCGGG CATGTCCACC
ACGGCGCTCG ACCTCAACGT CAACAAGGCC GAGATCAAGT CGCTCGCCGA CTTCACGCCC
AAGGACAAGA TCGCGATCCC GGGAATCAAG ACCTCGCTCG CCGCGGTCGT CCTGCAGATG
GCGGTCGCCA AGCAGTTCGG GCCGGAGAAC TACGGCAAGC TCGATGCGAG CACGGTCGGG
CTGCCGCATC CGGAGGCGGT TGCGGCGCTC CTGTCGGGCA AGACCGAGAT CGTGGCCCAT
TTCGCCTCGC CGCCCTTCAC CCAGGTCGAG CGCGCGGACC CGAAGATCCG CACCATCCTC
AAGGCGTCCG AGGTCTTCGG CCCGATCACC CTCGACGTGG TCTTCGCCCT CAAGCGCTTC
ACCGAGGCCA ACCCGAAGCT CACCCAGGCC TTCCTGGACG CCCTCGATCA GGCCAACGCC
TTCATCCAGG AGAACAAGGC CGAGACGGCC GAGATCTTCG CCCGCGCCTC GAAGGTGAAG
GTGACGCCCG AGGAGGTCCG GCCGATGCTG GACGACCCCG ACAGCCGGTT CTCGTCGACC
CCGACCGGCA TCATGGAATT CGCGACCTTC ATGCACCGCG TCGGCATCAT CAAGACGAAG
CCGGCCGCCT GGACGGACCT GTTCATTCCC GCCCTTCGCG AGCGGGCGGG GAGCTGA
 
Protein sequence
MLGQKWLRLA AGAAIALGLA TMPLRAEVSE VRISKGYGIL YLPLFVMQEK KFLEAQAAKA 
GLGDVKVTWL TLDGGNVIND AMIAGSLDIA GTGAPGFLAL WSKGRGSPKT EVIGVSGMST
TALDLNVNKA EIKSLADFTP KDKIAIPGIK TSLAAVVLQM AVAKQFGPEN YGKLDASTVG
LPHPEAVAAL LSGKTEIVAH FASPPFTQVE RADPKIRTIL KASEVFGPIT LDVVFALKRF
TEANPKLTQA FLDALDQANA FIQENKAETA EIFARASKVK VTPEEVRPML DDPDSRFSST
PTGIMEFATF MHRVGIIKTK PAAWTDLFIP ALRERAGS