Gene Mnod_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0042 
Symbol 
ID7306465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp44871 
End bp46067 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content72% 
IMG OID643597821 
Productlytic murein transglycosylase 
Protein accessionYP_002495396 
Protein GI220920095 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGTC GCGCGCGCAC CACGGTCGCC ACCCTGCTGT GCCTCGGCGG CCTCGCGCTG 
CCGGGCGCGG CGCAGGCGGA TTTCCGCTCC TGCCTCGCCG GTCTCGGCCG GGAGGCGGCG
GCGCACGGGA TCTCGCCGTC GACCTTCCAG TCGGCAACGG CAGGCATCGT CTACGACGAC
AAGGTGATCG AACTCTCGCA GGCCCAGCCC GAGTTCAAGA CGCCGATCTG GGACTACATC
GCGGCCCTCG TCGACGAGGA GCGGGTCGAG GACGGGCGCG CGGCGATGCG CCAATACGCC
TCGGCGCTCG CCCAGGCGGA GGCGCGCTTC AACGTCGACC GCTACACGAT CGCGGCGGTC
TGGGGGGTGG AGTCGAACTT CGGCAAGAAC CTCGGCAAGA TGCCGCTGGT GCAGTCCCTC
GCGACCCTCG CCTGCAGCTC CAACCGGCGC GCCGGGTTCT TCAAGGGCGA GCTGATGGCG
ACGCTCAAGA TCATCGACCG GGGCGACATC GAGGCGAGCC GGCTGACCGG CTCCTGGGCC
GGGGCCTTCG GGCAGACGCA GTTCATGCCC TCGACCTACC AGCGCCTCGC CGTCGACCTC
GACGGCGACG GGCGGCGGGA CGTGGTCGAT TCGGTGGCGG ATGCGGTCGG CTCGACGGCG
AACTTCCTGC GGGTTGCCAA GTGGCAGAAC GGGCTGCCCT GGGGCTACGA GGTGCGCCTG
CCGCGCGGCT TCAATCTCGC GGCGGCCGGG CGGAAGTCCA AGCGCCCGGT CAGCCACTGG
GCGAGCCTCG GCGTCACGAG GATCGATGGG CGGCAGCTCA CCGGCGAGGG GCAGGCCGGC
ATCATCGCGC CCGCGGGCAT CGACGGGCCG GCCTTCCTGG TGACGAGGAA CTTCGACGCG
ATCTATTCCT ACAACGCGGC GGAGTCCTAC GGCCTCGCCA TCGCGATCCT CTCCGACCGC
CTGCGCGGGC GGTCGGGTAT CCAGACCGCA TGGCCGACCG ACGATCCGCC CCTTTCCCGT
GCCGAGCGCC GGGCGCTCCA GAGCGCGCTG GCGTCCCGCG GCTACGACGT GGGCGAGCCG
GACGGGCGCG TGGGCGCCAA GACGCGCGAC GCCATCAAGG ACATCGAGCG CCAGCTCGGC
TGGCCCCAGA CCGGCCGTCC CGGCGCCAAG GTGCTGGAGG CGCTGCGGCG CGGCTGA
 
Protein sequence
MTRRARTTVA TLLCLGGLAL PGAAQADFRS CLAGLGREAA AHGISPSTFQ SATAGIVYDD 
KVIELSQAQP EFKTPIWDYI AALVDEERVE DGRAAMRQYA SALAQAEARF NVDRYTIAAV
WGVESNFGKN LGKMPLVQSL ATLACSSNRR AGFFKGELMA TLKIIDRGDI EASRLTGSWA
GAFGQTQFMP STYQRLAVDL DGDGRRDVVD SVADAVGSTA NFLRVAKWQN GLPWGYEVRL
PRGFNLAAAG RKSKRPVSHW ASLGVTRIDG RQLTGEGQAG IIAPAGIDGP AFLVTRNFDA
IYSYNAAESY GLAIAILSDR LRGRSGIQTA WPTDDPPLSR AERRALQSAL ASRGYDVGEP
DGRVGAKTRD AIKDIERQLG WPQTGRPGAK VLEALRRG