Gene Mnod_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0021 
Symbol 
ID7306444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand- 
Start bp22760 
End bp23692 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content73% 
IMG OID643597800 
ProductSubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_002495375 
Protein GI220920074 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00384901 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCTC CCTCTCCAAC GTCGCGGGCC TTGTGCACAC TCAGCCGCCG CAAGCTGATT 
CTCGGGGCGA GTGCCGCCGC GCTCACCGGG AGCGCCGCCC GCGCGGCGGA GACGCCCGTG 
ACCGTGGCCT CGAAGGGCGA TGCGGAGGGC ACGCTGCTCG GCCAGATGAT CCTCCAGACC 
CTGCGCCGCA TCGACATCCC GGTCGTCGAC CGGCTGCAGC TCGGGCCGAC GCGGATCGTC 
CGCACGGCCC TCGTCGCGGG CGAGATCGAC GCCTATCCGG AATATACCGG CAACGTGGCG 
TTCTTCTCGG GGACGGAGAC CGATCCGGCC TGGAAGCGTG CCGAAACCGC CTACGCGGCG 
GCGCGGCGCT TCGACGCCTC GCGCGGGCTG GTCTGGCTGA CGCCCGCGCG GGCGAACAAT 
TCCTGGCAGA TCGCCGTGCG GGGCGGCCTC GCGCGGGCCG AGGGGCTGTC GAGCATGGAG 
GATTTCGCCC GGGCGGTCCG GCGCGGCCTG ATCGAGTTCG CCGCCTCCGC CGAGTTCGTG 
GAGAGCCCGG CGGCGCTCGC GGCCTACGAG CAGGCCTACG GCTTCGTCCT GCCCCGGGAG 
CGCATCGTCA CGCTGCCGGG CGGCGACACC TCGGTCACCC TGCGGGCGGC CGCCCAGGGG 
ATCAGCGGCG TCAATGCCGG GATGGTCTAC GGCACCGACG GGGCCATCAC CGCCCTCGAC 
GTAGTGGTGA TGGCCGATCC CAAGGGCGCG CAGATCGTCT ACGAGCCGGC CCCGGTCTTC 
CGCGAGCCCG TCCTCGCCCG CCACCCGGCG ATCGCGCCCG CCCTCGACAG GGTCTTCGCG 
GGGCTCGACC TGCCGACCCT GCGCCGCCTC AACGCCGCCA TCACCGTCGA GGGCGAGACC 
CCCGAGGCGG TGGCCCGTCG CCATCTCGGG TGA
 
Protein sequence
MNPPSPTSRA LCTLSRRKLI LGASAAALTG SAARAAETPV TVASKGDAEG TLLGQMILQT 
LRRIDIPVVD RLQLGPTRIV RTALVAGEID AYPEYTGNVA FFSGTETDPA WKRAETAYAA 
ARRFDASRGL VWLTPARANN SWQIAVRGGL ARAEGLSSME DFARAVRRGL IEFAASAEFV 
ESPAALAAYE QAYGFVLPRE RIVTLPGGDT SVTLRAAAQG ISGVNAGMVY GTDGAITALD 
VVVMADPKGA QIVYEPAPVF REPVLARHPA IAPALDRVFA GLDLPTLRRL NAAITVEGET 
PEAVARRHLG