Gene Mnod_8560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_8560 
Symbol 
ID7300789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011892 
Strand
Start bp299770 
End bp300732 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content70% 
IMG OID643597564 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002495140 
Protein GI220919837 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.974335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAGA CAATTCTGGT CACGGGCGGC TGCGGCTGGC TGGGCAGCGA GATCGTCCGG 
ACGCTGCTCG CCCGTGGCGA TTCCGTTGTG GCGACCGATC TCGCGATCTC GCCCGCCCTG
TCGGCGCTTC TCGCCCGGGA GCCGCGGCTC GCCGCGGCAG CGGCCGACCT TGGCGAGTGG
CCGCAGGTGC TGCGGCTGTT CGAGCAGCAT CGGGTGGATG CGGTGATCCA CGCGGCCGCG
ATCGTCGGTG TCGTTCAGGC CGCCGACATT CCCCTCAAGG CGCTGCGCGT CAACGTCGAG
GGGTCGATCA ACCTCTTCGA GGCGATGCGG CTGCACGGGG TCAAGCGCGT CGTGCACGTC
AGCACGGAGG AAACCTACGG CGATTTCCAG GCGCCGATCA TCGACGAGGA GCACTCGCAG
AAGCCGGTCA GCGTCTACGG GCTGACCAAG CTCGCGGTCG AGCATTACGG GCGGGTCTAC
TCGCGCGAGT CCGGGCTCGA ATGCATCAAC GTGCGCACCT GCTGGGTCTA CGGGCCGCAT
CTGCCACGCC TGCGGCTGCC CCGGACCTTC ATCGAGGCGG CCTTGCGCGG CGAGGCCTTC
CACCAGCCCG ACGGCGGCAA CTTCGCCGTC GATCAGGTCC ACATCTCCGA CACGGTGGCC
GGCATCCTGC TGGCCCTCGA CAAGCCGCAG CATCGCTTCG ATGCCTACAA CGTCGCGACC
GGCGCCGCCC CGAGCATCGC CGACACCGCC GAGGCGGTGA ATCGCGCCAT CCCGGGCGCG
CGCATCACCG TGGGCGATTG CGGGCCGTAC TACCACGGCG GCTCCGTGCT CAGCGCCCGG
AAGGGCGCCC TCGACATCCG CCGCGCCGAG GTCGAGCTGG GTTACCGGCC CCGCTACGAC
ATCCAGCGGG GGATCGAGGC GACCATCGCG GTGACGCGGG GGGAGCCGGT GCCCGCCTTG
TGA
 
Protein sequence
MSKTILVTGG CGWLGSEIVR TLLARGDSVV ATDLAISPAL SALLAREPRL AAAAADLGEW 
PQVLRLFEQH RVDAVIHAAA IVGVVQAADI PLKALRVNVE GSINLFEAMR LHGVKRVVHV
STEETYGDFQ APIIDEEHSQ KPVSVYGLTK LAVEHYGRVY SRESGLECIN VRTCWVYGPH
LPRLRLPRTF IEAALRGEAF HQPDGGNFAV DQVHISDTVA GILLALDKPQ HRFDAYNVAT
GAAPSIADTA EAVNRAIPGA RITVGDCGPY YHGGSVLSAR KGALDIRRAE VELGYRPRYD
IQRGIEATIA VTRGEPVPAL