| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_8559 |
|---|
| Symbol | |
|---|
| ID | 7300788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011892 |
|---|
| Strand | - |
|---|
| Start bp | 298989 |
|---|
| End bp | 299699 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643597563 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002495139 |
|---|
| Protein GI | 220919836 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCTT CTTCTTCCAT CGCCCTCGTG TTCGGGGGCT CTCGCGGCAT CGGCGCCGCC
TGCGTCGACG TCCTCGCGGC CAGCGGCTGG CAGGTCGCCT TCACGTATGT CAGCCGCGCC
CCCGAAGACG CTCCGCACCG GCACTATCCC GCCGACATCC GCGACGCCGC CGCCGTGGCG
CGGGTCTTCG ACCGGGTGGA ATCCGATCTC GGCGCGGCCC CCACGGCCAT CGTGGCGAAT
GCAGGCATCA ACGTCCCGGC CGCCCCCATG GCGCAGTTCG ACCCCGACAA CTTCCGCCAG
CTGGTCGAAG TCAATGTGGT CGGCGCCTTC AACATCCTCG CCGAGGCGGC CCGGCGGGTT
CGGGATGGCG GCGCCATCGT GGCGGTGACG ACGTCGCTCG TGCGCCACGC CGTGCCGGGA
ACCGGCCCTT ACACCGCCAG CAAGGCGGCG GTGGAGAGCA TGGTGCGCGC CATGGCCAAG
GAACTCGCTG GCCGCCGCGT CCGGGTCAAC GGCGTGGCGC CGGGGCCGGT CGACACCGAC
CTCTTCAACG CCGGCAAGAC CGAGGAGGCC AAGCAGCGCA TGGCGGCCTT CAGCCCCTTC
AACCGGATCG GCCGGCCCGA GGAGGTGGCG CAGGTCGTGC GCTTCCTGCT CTCCGAGGAG
AGTTCCTGGG TCCACGGTCA GATCGTGCAG CCGAACGGTG GCATGGCGTG A
|
|---|
| Protein sequence | MTASSSIALV FGGSRGIGAA CVDVLAASGW QVAFTYVSRA PEDAPHRHYP ADIRDAAAVA
RVFDRVESDL GAAPTAIVAN AGINVPAAPM AQFDPDNFRQ LVEVNVVGAF NILAEAARRV
RDGGAIVAVT TSLVRHAVPG TGPYTASKAA VESMVRAMAK ELAGRRVRVN GVAPGPVDTD
LFNAGKTEEA KQRMAAFSPF NRIGRPEEVA QVVRFLLSEE SSWVHGQIVQ PNGGMA
|
|---|
| |