| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_8552 |
|---|
| Symbol | |
|---|
| ID | 7300578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011892 |
|---|
| Strand | + |
|---|
| Start bp | 289779 |
|---|
| End bp | 292130 |
|---|
| Gene Length | 2352 bp |
|---|
| Protein Length | 783 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643597557 |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_002495133 |
|---|
| Protein GI | 220919830 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1201] Lhr-like helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCGGC AGGTCGAGCT TCCGGTCGCG GCGGGCCGCG CGGAAGAAGC CTCGCGTGCC
TTCGATCGGC TCGCGGAGCC GGTCCGGCGC TGGATCTGGC AGCAGGGCTG GTCGACCTTG
CGCGACGTGC AGGAGCGGGC GGTCCCCGCG ATCCTCGCAG GGGGCGACGT CATCCTCGCC
GCCCGGACCG CCGCGGGCAA GACGGAGGCC GCCTTCCTGC CGCTGCTGTC GAGGGTGCTG
CCGAAGCGGG ATGGCGGACG GCCGGGCTTC TCCCTGCTCT ACGTCAGCCC GCTCAAGGCC
CTGATCAACG ATCAGTTCCG GCGCCTGGAG AGCCTGCTGG AGGCCTGCGA CATGCCCCTG
CATCGCTGGC ACGGCGACGT CTCGGCCGAC GCGAAACGCC GCGCCCGCGA GCGGCCGCAG
GGGGTCGTCC TCATCACGCC CGAATCGCTG GAGGCGACGC TCGTACGGCG GGGGCGGGAG
GCTCCCCGCC TGTTCGGAGC GCTCGACGCC ATCGTCATCG ACGAGCTTCA CGCCTTCATC
GGCACCGAGC GGGGGCGGCA GCTGCAATCC GTCCTCTCCC GCATCGAGGC TTGCGCAGGA
CGGGACCGCA TCGACCGGGT CGGACTCTCG GCAACCCTGG GCGACATGGA CCTCGCCCGC
GAGGCCCTGC GCCCGGGAGC GTCCGACGCC GTCACCCTGG TGGAGAGCCA GGAGGGGGGC
ACAGAGCTGC TCCTGCAGAT TCGCGGCTAC GAACGTCCTT TGCGGCAGCC GACCGCGCCG
CCGAAGGATA GGCTGCAGCA GCCCTCCGGT CCCGGGCCGA ATGAGGAGAG AGAAGCCGCA
TCGGCCGTCC CCGATCTCTG CGCGGTCGAG GCGATCCAGA CCGCATCGCT GGTGGAAGAG
CCGGTGGCCC GGCATCTCTT CGAGGTTCTG CGCGGCCGTC GCAATCTCCT CTTCGCCGGC
TCCCGGCAGA ACGTCGAGAT CTACACCGAT CGCCTTCGGG CGCTGTCCGA AGCGGCCCGC
CTGCCCAACG AGTTCTTCGC GCATCACGGG AACTTGTCAC GCGCCGAGCG CGAGACCGTC
GAACTTCGCC TGCGCGAGGA CGCGCGCCCG ACGACCGCGG TGGCGACCAC CACGCTGGAA
CTCGGCATCG ACATCGGCGA TGTCGAGAGC GTGGCTCAGA TCGGACCGGG CTGGTCGGTA
TCCTCGCTGC GGCAGCGCCT CGGTCGGTCC GGGCGTCGGC CGGGCAAGCC GGCGGTCCTG
CGCATCTACG TGATCGAGGA CGAGGCAGGG CCGACACTCC ACCCGGCCGA CCGCCTCAGG
CTCGACCTCG TGCAGGCCGT GGCGATGGTC GAGCTGTTGC TGGAGCGCTG GTGCGAGCCG
CCGCGAACAC GGGGCCTCCA TCTCTCCACC CTGGTCCACC AGACGCTCGC CCTCATCGTG
CAGACTGGTG GGCTGCGTCC CGGGACGGCT TGGCAGCTCC TCTGCGAACA CGGCCCCTTC
CGCAACGTGA GCCGCGACCT CTTCGTCGAG GTGCTCCGGA GCATGGCACG TCCCGAGGCG
GAACTCGTGG AGATGTCCCC CGATGGACTG CTGATGCTCG GCCCGAGGGG CGAGCGCCTC
ACAGCCGGGC ACGACTTCTT CGCCGTGTTC CAGAGCCCGG AGGAGTACCG GATCGTCGAA
GGCAGCCGCC CTCTCGGAAC CGTCCCGCTC GACACTACCC TCGCACCGGG GCAGACCATC
ATCTTCGCCG GGCGCCGATG GTGCATCGAG ACCGTCGACG AGCGCGCCAA GGTGGTTGTG
GTCATCCCGA CGAATGCGGC GCTGCCGCCC CGCTTCGATG GCAGCGGGGC CGGTCTCCAC
GACAGGGTTG CTGCGGCGAT GCGGGCGTGC CTCTCGGGCA CGCATGTCCC ACCCTTCCTC
GACGCGGGCG CACGCACCCT TCTCGGTCAG GCGCGGGACG CCTTCTTCGC GTTCGGCCTC
GATCGTGGCT CCATCGTCGA GGTCGAGGGC GATTGCGTGA TCTTTCCTTG GGCCGGCAGT
CCGAAGCTCG AAACCCTGAC CCTCGCGCTT CGCACGCGCC ACTTCCAAGC CTCACCGTTT
CAACATGTGA TCGAGGTGCG GGACTGTTCC GCCCGCAACC TGCGCGCCGC GCTCGCGGAG
ATCGCGGGTT CGCCGCCTCC CGACGGCCAC GAACTCGCCC GGTTCGCGGT AAAGCCGATG
CGGGAGAAAT ACGATGCCTA CCTCACCGAG GCCCTGCTCG TGCAGGCGAT GACCGTCGAG
CGTCTGGAGG CGCAAGCGCT TCCCGGCATC GCGCGTCTCG TCCTCGATCC GCCATTCTCA
AGCGGCCCCT GA
|
|---|
| Protein sequence | MTRQVELPVA AGRAEEASRA FDRLAEPVRR WIWQQGWSTL RDVQERAVPA ILAGGDVILA
ARTAAGKTEA AFLPLLSRVL PKRDGGRPGF SLLYVSPLKA LINDQFRRLE SLLEACDMPL
HRWHGDVSAD AKRRARERPQ GVVLITPESL EATLVRRGRE APRLFGALDA IVIDELHAFI
GTERGRQLQS VLSRIEACAG RDRIDRVGLS ATLGDMDLAR EALRPGASDA VTLVESQEGG
TELLLQIRGY ERPLRQPTAP PKDRLQQPSG PGPNEEREAA SAVPDLCAVE AIQTASLVEE
PVARHLFEVL RGRRNLLFAG SRQNVEIYTD RLRALSEAAR LPNEFFAHHG NLSRAERETV
ELRLREDARP TTAVATTTLE LGIDIGDVES VAQIGPGWSV SSLRQRLGRS GRRPGKPAVL
RIYVIEDEAG PTLHPADRLR LDLVQAVAMV ELLLERWCEP PRTRGLHLST LVHQTLALIV
QTGGLRPGTA WQLLCEHGPF RNVSRDLFVE VLRSMARPEA ELVEMSPDGL LMLGPRGERL
TAGHDFFAVF QSPEEYRIVE GSRPLGTVPL DTTLAPGQTI IFAGRRWCIE TVDERAKVVV
VIPTNAALPP RFDGSGAGLH DRVAAAMRAC LSGTHVPPFL DAGARTLLGQ ARDAFFAFGL
DRGSIVEVEG DCVIFPWAGS PKLETLTLAL RTRHFQASPF QHVIEVRDCS ARNLRAALAE
IAGSPPPDGH ELARFAVKPM REKYDAYLTE ALLVQAMTVE RLEAQALPGI ARLVLDPPFS
SGP
|
|---|
| |