| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_4382 |
|---|
| Symbol | |
|---|
| ID | 7299545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 4876691 |
|---|
| End bp | 4878631 |
|---|
| Gene Length | 1941 bp |
|---|
| Protein Length | 646 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643597188 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002494765 |
|---|
| Protein GI | 220919461 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00540034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGACCA TATTCCCCCT CCTGCGAGGG ACGGCCGGGC AACCGCCGTT CCCCGGGGCG
GATCTCGACG GCTCCCTCGG CAAGGACTCC GGGCACCGCA TGCGGTTCGG CGCGAAGATC
GGGCTCGTGC TCCTGGCGGT CGGGGTCCTC CCGGTCGCGC TGCTCGGGCT CGTCTCGTAC
ACCGTGAGCC GCGACGAGCT GCAGCGCACC GTCGGCCGCA TGCAGGTCCA GGCCGCCGAG
GACCTGGCGC TGTTCACCGA GCGGTTCGTC GGGAACTCGG TCGAGAGCCT GCGCCTCGCG
GTCTCGGCGA TGCCCTTCGA CGAGTTCTCG CGCGGCGAGC TGTCGGCGGT GCTCGACATC
CCGTACCGGC AGCTCCCGTT CGTCTCGATC CTGGTGCTCG TCGACGACGC GAACACGCCG
GTGGCCGGGC CGGTGTTCGA GCGGCGGCCG GAGCGCGATC CGGCGCTGGC CGGCCGCGAG
CCGGTGGACG ACCGCGACCT CGATCGCTTC GCCCGGCAGA TCCCGCGAGC GCCCGCGAAG
GCCGGGGCGA CCACGCTCTC GGCCCCGTAC CGCGGCGAGC GCGGCCCGGC CCGCATCGCG
GTGGCGCTCC GCATCGGCAA GGACCGGACG CTCGCGGCGG AGATCCTGCT CCGCGACGTG
GAGCACCGCA TCGCCGAGCT GTCCGGCGCC GGCGGGCTCG CGTACCTGGT GGACGGCCAG
GGCGCGCTCA TCGCGGGGGT GCAGGCCGGG CCGCTCACCG ACGAGGAGCG CCGGCTGTCC
GAGGTCGGGT TCGGGAAGGG CCTGGCCTGG TCGCGGCTGG TGCGGCGGCA GGACGGCGAG
CGCTGGCTGT CCGCGTTCGC GCCGCTCGGC TCGCTGGGCT GGGGCGCGGT GGTGGCGCAG
CCCATGGCGG TCGCGTTCAG CGCGGCGGAG CGGCTGCGCT TCTACACGGT GGGCTGGTCC
GCGGTGGCGC TCGTGCTGGC GCTGCTGGTG GGCGCGGTGC TGGCGCGGAT GGTGACGCGG
CCGGTGGAGC GGCTCTCGCG CGCCGCGGCC GCCATCGCCG CCGGCGACTT CTCGGCCCCG
GTGTCGGAGA AGGGCCGGGA CGAGATCGCC GACCTGGGCC GCGCCTTCGG CCGCATGACC
GGGGAGCTGC GGCGGCGCGA CGAGGAGATC CGCGGCTGGA ACCGCGAGCT GCAGTCGCGC
GTCGAGGAGC GCACCGCCGA GCTGAAGACC GCGCAGGACC AGATCCTCCG CACCCGCCGC
CTGGCCGCGC TCGGCTCGCT CGGCGCGGGC CTGGCGCACG AGCTCAACAA CCCCATGACC
GCCATCGTGG GCTACCTCGC CATCCTGAAG CGCGAGCTGC CGGCGGGCAG CGCGCACGCC
GAGATGATCG GGCGGGCGCA GGAGCAGACC GCGCGCGTGG CGCGGGTGGT GGAGGACCTG
CGCAGCTTCG CCGACCAGGA GCGGTCGATG CAGGGCCGGC GCTTCTCGCT GGTGGCCCCG
GTGCGCGCCG CGCTGGCGCT CTACGAGGAC CGCCTGCGCG CCGCCGGCAT CGAGCTCACC
ACCCGCTTCG ACGAGCGGCT CCCCGACGCG CAGGGCGACC CGGTGCAGAT CCAGCAGGTG
GTGGCGCACC TGGTGGAGAA CGCCATCAAC GCCATGCCGC GCGGCGGCTC GCTGGAGGTG
TCGCTCGGCA CGGTGGACGG CGAGGCGCTG CGGCTGCGCA TCGCCGACAC CGGCAAGGGC
ATCCCGGTCA CCATCCGCGA GCGGATCTTC GACCCGTTCT TCACCACCAA GGAGCACCCG
GGCCGCGTCG GCCTGGGGCT GTCGGTGTCG CACAGCATCG TGGAGGCCCA CCACGGGCGC
ATCGTGGTGG AGAGCGAGGA GGGGGCGGGG GCGGCCATCA CGGTGCTGCT CCCGGCGGCC
ACGGCCGCGC ACCTCGCCTG A
|
|---|
| Protein sequence | MATIFPLLRG TAGQPPFPGA DLDGSLGKDS GHRMRFGAKI GLVLLAVGVL PVALLGLVSY
TVSRDELQRT VGRMQVQAAE DLALFTERFV GNSVESLRLA VSAMPFDEFS RGELSAVLDI
PYRQLPFVSI LVLVDDANTP VAGPVFERRP ERDPALAGRE PVDDRDLDRF ARQIPRAPAK
AGATTLSAPY RGERGPARIA VALRIGKDRT LAAEILLRDV EHRIAELSGA GGLAYLVDGQ
GALIAGVQAG PLTDEERRLS EVGFGKGLAW SRLVRRQDGE RWLSAFAPLG SLGWGAVVAQ
PMAVAFSAAE RLRFYTVGWS AVALVLALLV GAVLARMVTR PVERLSRAAA AIAAGDFSAP
VSEKGRDEIA DLGRAFGRMT GELRRRDEEI RGWNRELQSR VEERTAELKT AQDQILRTRR
LAALGSLGAG LAHELNNPMT AIVGYLAILK RELPAGSAHA EMIGRAQEQT ARVARVVEDL
RSFADQERSM QGRRFSLVAP VRAALALYED RLRAAGIELT TRFDERLPDA QGDPVQIQQV
VAHLVENAIN AMPRGGSLEV SLGTVDGEAL RLRIADTGKG IPVTIRERIF DPFFTTKEHP
GRVGLGLSVS HSIVEAHHGR IVVESEEGAG AAITVLLPAA TAAHLA
|
|---|
| |