Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_4332 |
Symbol | |
ID | 7299495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 4824536 |
End bp | 4825213 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643597138 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_002494715 |
Protein GI | 220919411 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAGCTGG GCGACCCCGC GTTCGTGCTC CCGGAGCGCC GGGCCCGCAT CGACGCGGTG GTGGCGAACC GCACCCGCAC GCTCACCGTG GTGATGGAGG CGTTCTGCGA TCCGCAGAAC GTGAACGCGG TGCTGCGCAC CTGCGAGGCG TTCGGGGTCC AGACGCTGCA CGCGATCGAG GGGCCCATGA AGCCCTACGA CCGCAACAAG AAGATCAGCC AGAACGCGGA CAAGTGGCTG GACGTGCGGC GCTGGTCCTC CACCGCCGAG TGCCTCGCCC ACCTCCGCTC GGAGGGGTTC GCGATCTACG CCACGCACCT GGGCGAGCGG TCCACGCCGA TGGCCGGGCT CTCCTTCGCC GGCAAGGTGG CGCTCGTGTT CGGGAACGAG CAGCGCGGCG TCTCGGAGGA GGCGCTGGCG CTCGCCGACG CCTGCTACGC GATCCCCATG CGCGGCTTCG TCCAGTCGCT GAACGTCTCG GTGGCGGCGG CCATCTCGCT CGCCCACGCG GTGGAGCGGC GCGAGGTCGA GCGCGGCCGC CACGGCGACC TGCCCGAGGA CGAGGCGCAG GTGCTGCGGG AGCGCTTCTA CCTGCTGGCG GTGAAGCAGC GCAGCCGCAT CGCCAAGGCC GAGGCGGTCC GCGACCGGAT CGCGCGGCAC GCGCGGTTTC GCGGCTGA
|
Protein sequence | MKLGDPAFVL PERRARIDAV VANRTRTLTV VMEAFCDPQN VNAVLRTCEA FGVQTLHAIE GPMKPYDRNK KISQNADKWL DVRRWSSTAE CLAHLRSEGF AIYATHLGER STPMAGLSFA GKVALVFGNE QRGVSEEALA LADACYAIPM RGFVQSLNVS VAAAISLAHA VERREVERGR HGDLPEDEAQ VLRERFYLLA VKQRSRIAKA EAVRDRIARH ARFRG
|
| |