| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_4312 |
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| Symbol | ligB |
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| ID | 7298387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | - |
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| Start bp | 4804641 |
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| End bp | 4806182 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 643597118 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_002494695 |
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| Protein GI | 220919391 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCTCG CCGAGCTCGC CGAGGTCTCC CGCGCCGTGG CCGCCACCCC GGCGCGCCTC
GAGAAGATCG CGCGCCTCGC CGAGGCGCTC CGCCGGCTCG CGCCGGACGA GCGCGCGGTG
GGCGCGAGCT GGCTCGCGGG CGACCTGCCC GGCGGGCGCA TCGGGATCGG CGGCGCCACC
GTGCGGGCCG CGCTCGACGC GGCGCCGGCG GAGGGCGGCG GGCCGGGGCT CACGGTGGCG
GAGGTGGACG CGGCGCTGGG CCGCATCGCG ACCGCGTCCG GCGCGGGCTC GGCCGGCGCC
CGTCGCCGGG AGCTCGATGC GCTGCTCGCC CGGGCCGGCG CCCCCGAGCG CTGGTTCCTG
GCGGCGCTCC TCCTCGGCGA GCTGCGGCAG GGCGCGCTGG AGGGCGTGCT CGCCGACGCG
GTGGCGCGGG CCGCGGGGCT CCCCGCGGCC GAGGTCCGGC GCGCCGCCAT GCTCGCCGGC
GCGCTCCCGC CGGTCGCGGT CGCGGCGCTC TCGGAGGGCG CCGCCGGCCT GGCGCGCTTC
CGGCTGCGGG TGGGCGAGCC CGTGTCGCCC ATGCTGGCGC AGACCGCGGC GGACGTGGAG
GAGGCGCTCC GGGCGCTCGG CGGCGAGGCC GCGCTGGAGT GGAAGCTGGA CGGCGCGCGG
ATCCAGGCGC ACCGCGACGG CGGCGAGGTG CGCGTGTTCT CCCGCTCGCT GCGCGACGTG
ACCGCGGCCG TGCCCGAGGT GGTGGCGCTC CTGCGCGCCG CGCCCGAGCC GCGGCTCGTG
CTCGACGGCG AGGCCATCGC GCTCCGCGCC GACGGCACGC CCGAGCCGTT CCAGGTCACC
ATGCGCCGCT TCGGCCGGAG GCTGGACGTG GAGCGCCTCG CGCCCGATCT GCCGCTCACC
GCGTTCTTCT TCGACGCGCT GGTGGCCGGC GGCGCAGAGC TGCTGGCGAG CCCGGAGCGC
GTGCGCTGGG CCGCGCTCGA GCGCGCCGTC CCGGCGGAGC AGCGCGTCCC GCGGCTCGTC
ACCCGCGATC CCGCCGAGGC CGGCGCGTTC CTCGAGGACG CGCTCGCCCG CGGTCAGGAG
GGCGTGGTGG CGAAGGCGCT CGACGCGCCT TACGAGGCCG GCCGCCGCGG CGCGGCGTGG
CTGAAGGTGA AGCGCGCGCA CACGCTCGAC CTGGTGGTGC TCGCCGCGGA GTGGGGCAGC
GGCCGGCGCC GCGGCTGGCT CTCCAACCTG CACCTCGGCG CGCGCGACCC ATCCACCGGA
GGCTTCGTCA TGCTCGGCAA GACGTTCAAG GGCATGACCG ACGCCATGCT CGCGTGGCAG
ACCGAGCGGC TGAAGGCGCT CGCCACGGGT CCCCTCGACG CCTGGCAGGT CCCGGTGCGC
CCCGAGCTGG TGGTGGAGGT CGCGTTCGAC GGGATCCAGT CCAGCCCGCG CTACCCCGGC
GGCCTCGCCC TCCGCTTCGC GCGCGTGAAG CGCTACCGCG AGGACAAGCG CCCCGAGGAC
GCGGACACGA TCGAGACGGT GCGGGGGTTG TACGGAGGGT GA
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| Protein sequence | MLLAELAEVS RAVAATPARL EKIARLAEAL RRLAPDERAV GASWLAGDLP GGRIGIGGAT
VRAALDAAPA EGGGPGLTVA EVDAALGRIA TASGAGSAGA RRRELDALLA RAGAPERWFL
AALLLGELRQ GALEGVLADA VARAAGLPAA EVRRAAMLAG ALPPVAVAAL SEGAAGLARF
RLRVGEPVSP MLAQTAADVE EALRALGGEA ALEWKLDGAR IQAHRDGGEV RVFSRSLRDV
TAAVPEVVAL LRAAPEPRLV LDGEAIALRA DGTPEPFQVT MRRFGRRLDV ERLAPDLPLT
AFFFDALVAG GAELLASPER VRWAALERAV PAEQRVPRLV TRDPAEAGAF LEDALARGQE
GVVAKALDAP YEAGRRGAAW LKVKRAHTLD LVVLAAEWGS GRRRGWLSNL HLGARDPSTG
GFVMLGKTFK GMTDAMLAWQ TERLKALATG PLDAWQVPVR PELVVEVAFD GIQSSPRYPG
GLALRFARVK RYREDKRPED ADTIETVRGL YGG
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