| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_4310 |
|---|
| Symbol | |
|---|
| ID | 7298385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 4802239 |
|---|
| End bp | 4803480 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643597116 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_002494693 |
|---|
| Protein GI | 220919389 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCT TCCTCGACAC GCTGGCGATG GCCATCGGCA CGCTGCGCGG GAACGTGCTG
CGGTCGATGC TGACGCTGCT CGGCATCGTG ATCGGCGCCT GCACCGTGGT GGCGATGATG
TCGCTCACCG AGGGGCTCCG CCTCAAGATG ACGACCGACT TCGCCATGCT GGGCGCCGGC
GCGTTCCAGG TCCAGAAGTG GCCGCACATG AACTTCGGGC CGATCGACTG GCGCAAGTAC
GAGCAGCGCA AGCCGCTCAC CCGCGAGCAG GGCGAGGCGC TCCGGTCGCT CCCGCACGTG
AAGTTCGTGT CGATCGAGGA GTACCCGAGC GGCGACGGCA ACGGCGCGGC GGTGGTCTCC
ACGCCGGAGC GGGCCACCCG GCGCGAGGTC GCGTTCGGCG GGGTGCTCCC CGACTACGAG
CCCGCCAACG GCGTCACCGT CGGCCAGGGT CGGTTCATCA GCACCACCGA CGTGCTGCTC
GGCCGCCGGG TGACGTTCGT GGGCACCGAC GTGGTGGACG TGCTGTTCCC GAAGATGGAC
CCCATCGGCC GCGAGGTGCG CATCCGCGGC GTGCCGTTCG AGATCATCGG CGTCTCGATG
AAGCAGGGGA GCATCTTCGG CCAGTCGAAG GACTCCTGGG CGGTGGTGCC CTGGACCGCC
TACGAGGTCG CGTTCGGGCG GAACCGCAAC AACAACATCG CCATCCAGGC CACCTCGCCC
GAGGACCTGC CGCTCGCCAT GGACGAGGTG GTCGCGGCGT TGCGGCGGCT GCGCGGGCTC
GGGCCGCAGG AGGAGAACGA CTTCGAGCTG TTCTCCAACG ACACCTCGGC GGAGATGTTC
GACAACCTGG CGCGGATGGT GGGCGCGGCC ACGTTCGGCG TGTGCGCGCT GGCGCTGCTG
GTCGGCGGCA TCGGCGTCAT GAACATCATG CTCGTGTCGG TGACCGAGCG GACCCGGGAG
ATCGGCGTCC GGATGGCGCT GGGCGCCCGG CGCGGCCGCA TCCTGATGCA GTTCCTGCTC
GAGTCGATCA CGCTCTCCGG CCTGGGCGGC CTGGTGGGCG TCCTGGTCGG CGCCGGGCTC
GCCCTGGGCG CCCGCGCCGT GTTCGACGTT CCGGCGAGCA TCCCGGCGTG GGCGGTGATA
CTCTCCCTCG CCTCCGCCTG CGGGGCCGGG TTGCTGTTCG GCATCTACCC GGCCGCCCGA
GCCTCGAAGC TCGACCCGGT GGAGGCGATG CGGATCGAAT AG
|
|---|
| Protein sequence | MNAFLDTLAM AIGTLRGNVL RSMLTLLGIV IGACTVVAMM SLTEGLRLKM TTDFAMLGAG
AFQVQKWPHM NFGPIDWRKY EQRKPLTREQ GEALRSLPHV KFVSIEEYPS GDGNGAAVVS
TPERATRREV AFGGVLPDYE PANGVTVGQG RFISTTDVLL GRRVTFVGTD VVDVLFPKMD
PIGREVRIRG VPFEIIGVSM KQGSIFGQSK DSWAVVPWTA YEVAFGRNRN NNIAIQATSP
EDLPLAMDEV VAALRRLRGL GPQEENDFEL FSNDTSAEMF DNLARMVGAA TFGVCALALL
VGGIGVMNIM LVSVTERTRE IGVRMALGAR RGRILMQFLL ESITLSGLGG LVGVLVGAGL
ALGARAVFDV PASIPAWAVI LSLASACGAG LLFGIYPAAR ASKLDPVEAM RIE
|
|---|
| |