| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_4215 |
|---|
| Symbol | |
|---|
| ID | 7297869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 4696909 |
|---|
| End bp | 4697661 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643597021 |
|---|
| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
|---|
| Protein accession | YP_002494598 |
|---|
| Protein GI | 220919294 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.227064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGGTCT GCCGCTTCCG GCGCGCCGGC GTGGACCGGT ACGCGCTGGT GGAGGGCGAG
GTCCTGCGCC CGCTCACCGC CGCGCCGTGG GCGGGCGGCC TGCCCGAGGG GCCGGGGGTG
CCGCTCGCCG AGGCGACGCT GCTCGCGCCG GTGGAGCCGT CCAAGGTCGT GTGCGTGGGG
CGCAACTACG TGGCGCACGC CCGCGAGCTC GGCAACGAGG TGCCCACCAC CCCGCTCATC
TTCCTGAAGC CCTCCACCTC GGTGATCGGG CCCCAGGACG CGATCCGCTG CCCGGAGCAG
TCGCGCGAGG TTCACCACGA GGGCGAGCTC GGCGTGGTGA TGGGCCGGAC GCTCACGAAC
GCCAGCGCCG CCGAGGCGCG CGGCGCGATC TTCGGCTACA CCTGCCTGAA CGACGTCACC
GCCCGCGACA TCCAGCGCGA GGAGAAGCAG TTCACGCGCG CGAAGGGCTT CGACACGTTC
TGCCCGGTGG GCCCGGTGGT GGAGACCGCG TTCGACCCGC TCGACGCGTC GGTGGCCTGC
CGGGTGAACG GCACCGAGCG GCAGCGCGGC TACACCCGCG ACATGGCGTT CGACGTCTAC
GCGCTGGTGG CGTTCATCTC CGGCGTCATG ACGCTGCTCC CCGGCGACGT CGTCGCCACC
GGCACGCCCG AGGGCGTCGG GCCCATCCGG CGCGGCGACT GGGTGGAGGT GGAGGTGCCG
GGGATCGGCG TGCTGCGGAA CCCGGTGACC TGA
|
|---|
| Protein sequence | MRVCRFRRAG VDRYALVEGE VLRPLTAAPW AGGLPEGPGV PLAEATLLAP VEPSKVVCVG
RNYVAHAREL GNEVPTTPLI FLKPSTSVIG PQDAIRCPEQ SREVHHEGEL GVVMGRTLTN
ASAAEARGAI FGYTCLNDVT ARDIQREEKQ FTRAKGFDTF CPVGPVVETA FDPLDASVAC
RVNGTERQRG YTRDMAFDVY ALVAFISGVM TLLPGDVVAT GTPEGVGPIR RGDWVEVEVP
GIGVLRNPVT
|
|---|
| |