| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_4163 |
|---|
| Symbol | |
|---|
| ID | 7298267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 4648534 |
|---|
| End bp | 4649847 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643596969 |
|---|
| Product | amino acid/peptide transporter |
|---|
| Protein accession | YP_002494546 |
|---|
| Protein GI | 220919242 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3104] Dipeptide/tripeptide permease |
|---|
| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.65473 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGT GCCCCCGCAT GCCCGAGACC GCGAAGTCCC GCTTCCCGCC GTCCATCAAG
TTCCTCGCCT GGAACGAGGC CGCCGAGCGG TTCTCGTACT ACGGGATGGC GTCCATCCTG
GTGCTGCACA TGGTGCGGAA CCTGGGGTTC GCCGAGAACG AGGCGGTCAC CGCCTACCAG
GTGTTCACCG GCGCGGTGTA CCTCATGCCC ATCTTCGGCG CGCTGCTCGC CGACCGGTAC
TGGGGCCGGT ACAACACGAT CCTGTGGCTG TCGCTCGGGT ACGTGGCCGG GCACGCGGTG
CTGGCGGTGT GGGAGAGCGC CTGGGGGCTG CTGGTCGGCC TCTCGCTCAT CTCCATCGGC
GCGGGCGGCC TGAAGCCCTG CGCCTCCGCC TTCGCGGGCG ACCAGATCCC CGCGGAGGAC
AAGGGGCTGC TCGCGAGGCT GTACGACCTC TACTACTGGA TGATCAACCT CGGCTCGACC
GTCTCGACGA TCGTCATCCC GCTCCTGCTC GACCACGTGA GCCCGCGGGT GGCGTTCGGC
GTCCCGGGCG TCGCCATGGC GGCGGCGCTG CTGGTCTTCT GGCTGGGGCG CGGCCGCTAC
GTGCACGTGC CGCCGGCGCG CGTCGCCCCG CCCGCGGAGG ACGGCGGCCC GGGCCGCGGC
TCGGCGGCCG GCGCGGTGCT GCGCATCCTG GCGGTGTTCG CGCCGGTGAT CGTGTTCTGG
GCGCTCTTCT TCCAGTACGG GTCGTCGTGG ACGCTCCAGG CCGAGCGGAT GGACCGGCAC
GTGTTCGGCT TCCAGATCGC CGCCGGCAAC GTGCAGACGC TCGACGCGGC CATGGTGCTC
ACGTTCATCC CGGTGTTCGC CGTCTGGGTG TTCCCGGCCC TGGAGCGCCG CGGCGTGAAG
GTGACCGCGC TGCGCAAGAT GACCGTCGGC ATGTTCGTGA CGGTGCTGTC GTTCGTGGCG
GCGGCCGCGG TGGAGTCGGC GCTGCAGGGC GGGGCGGCGC TCCACGTGGC CTGGCAGATC
CCGCAGTACG TGTTCCTGGT GATCGGCGAG GTGCTGGTCT CGGTCACCGC GCTCGAGTTC
GCGTTCTCGC AGGCGCCGAA GCACCTGCGC AGCGTGGTGA TGGGGCTCTG GTACGTGACC
ATCTCGGTCG GCTCCCTGCT CACCGCGCTC GTCGCCTGGC TGAACCGCTT CCAGGGCGTC
GCGTACTACG CGTTCTTCGC GGCGATGATG CTCGCGGCCG CGTTCGTGTT CGCGGCGGTG
GCCCGCTGGT ACCGGCCGGT GGAGGCGCCG CCGGCGGCGG AGGCGGCGGC GTAG
|
|---|
| Protein sequence | MAQCPRMPET AKSRFPPSIK FLAWNEAAER FSYYGMASIL VLHMVRNLGF AENEAVTAYQ
VFTGAVYLMP IFGALLADRY WGRYNTILWL SLGYVAGHAV LAVWESAWGL LVGLSLISIG
AGGLKPCASA FAGDQIPAED KGLLARLYDL YYWMINLGST VSTIVIPLLL DHVSPRVAFG
VPGVAMAAAL LVFWLGRGRY VHVPPARVAP PAEDGGPGRG SAAGAVLRIL AVFAPVIVFW
ALFFQYGSSW TLQAERMDRH VFGFQIAAGN VQTLDAAMVL TFIPVFAVWV FPALERRGVK
VTALRKMTVG MFVTVLSFVA AAAVESALQG GAALHVAWQI PQYVFLVIGE VLVSVTALEF
AFSQAPKHLR SVVMGLWYVT ISVGSLLTAL VAWLNRFQGV AYYAFFAAMM LAAAFVFAAV
ARWYRPVEAP PAAEAAA
|
|---|
| |