Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_4114 |
Symbol | |
ID | 7297539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 4600682 |
End bp | 4602049 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 81% |
IMG OID | 643596921 |
Product | NusB/RsmB/TIM44 |
Protein accession | YP_002494498 |
Protein GI | 220919194 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.155532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGCC GCCCGACGAA CCCGGCCGCG GGCGCGCGCG GCATCGCGTT CGACGTGCTC CGGCGCGTCG AGGAGGGCGG CGCGTACGCG TCGCGCGCGC TCGACGCCGC GCTCGGCGCG GCCGGCGCGC TCGATCCGCG CGAGGCAGGG CTCGCCACCG AGCTGGTCTA CGGGACCCTG CGGCGGGCGC TCGCGCTCGA TGCCGCGCTG GCGCCGCACT CCCGCCGCGC GCTCGCCGAG CTGGACCCGG CCGCGCGCGT GGCGCTGCGG CTCGGCGCCT ACCAGCTGCT CGTGCTCGGC ACGCCCGCGC ACGCCGCCGT CGGCGAGACG GTGGCGCTCG CGAAGGCGGT GGACCACGGC CGCGCCGCCG GGTACGTGAA CGCGGTCCTC CGGTCGCTGT CGCGCGCGGC GCGCTTCCCG GACCCGCCGG CGCTCGAGGC GGATCCGGCC GGCCACGTCG CCGCGGCCGA GGCGCTGCCG CGCTGGGTGG CGGAGGAGTG GGTGGGCTGG CTGGGCGCCG GCGAGGCGCT GGCGCTCGCC CGGGCCATGA ACGCGCCCGC CCCGCTGTGC GTGCGCACGC CGGATCGCGA GGCGCTGCTC GCACGCGCCC GCGCCGCCGG CCTCGCCGCG GCGCCGGCCG CCCGGGCGCC GGGCGGGGTG GTGCTCACCG GCGCGTCGGT CGGCGAGCTG GCCCGCGCGG CCGGCGGCGT GCCGTTCCAG GTCCAGGACG AGGCCGCCCA GCTCGTGACG CTCCTCGCGG CGGGCGACCT GGCCGGCCGG CCGGCCCGCG TGCTCGACGC CTGCGCCGCG CCGGGCGGCA AGGCGTTCCA CCTGGCCGAG CTGCTCGGGC CCGGCGCCGA GGTGGTCGCG ATCGAGCTCC ACCCGCGCAA GGCCGACGAG CTGGCCCGCG AGGCGGCGCG GCGTGGCCTG CCCGCGGTGC GGGTGGTGTG CGCCGACGCA GGGAAGCCCA TCCCCGGGCT CGAGCCCGGG AGCTTCGACG CGGTGCTGGT GGACGCGCCC TGCGCCGGCC TCGGCACGCT CCGGCGCCAC CCCGAGCTGA AGCTGCGCCG GGCCCCCGGG GACCTGCCGC GCATGGCCGC GCTCCAGCGC AAGATCGCCC TGAACGCGGC GCGCTACGCC CGGCCCGGCG CGCCGGTCGT CTACTCGATC TGCTCGCTCT CCCGCGCCGA GGGGCCGGAG GTGGTCGAGA CGCTGCTCGG CGAGGGCTTC CGCCGCGCCC CGCCGCCCGC CGGCTTCCCG GCCGACGTGC TCGACGCGCG CGGCGATCTC CTCACCCTCC CGAGCCGCCA CGGGACCGAC GGCTTCTACG CCGCGCGGCT GGTGCGGGAC GTGCCCTCCA CCGACTAG
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Protein sequence | MAGRPTNPAA GARGIAFDVL RRVEEGGAYA SRALDAALGA AGALDPREAG LATELVYGTL RRALALDAAL APHSRRALAE LDPAARVALR LGAYQLLVLG TPAHAAVGET VALAKAVDHG RAAGYVNAVL RSLSRAARFP DPPALEADPA GHVAAAEALP RWVAEEWVGW LGAGEALALA RAMNAPAPLC VRTPDREALL ARARAAGLAA APAARAPGGV VLTGASVGEL ARAAGGVPFQ VQDEAAQLVT LLAAGDLAGR PARVLDACAA PGGKAFHLAE LLGPGAEVVA IELHPRKADE LAREAARRGL PAVRVVCADA GKPIPGLEPG SFDAVLVDAP CAGLGTLRRH PELKLRRAPG DLPRMAALQR KIALNAARYA RPGAPVVYSI CSLSRAEGPE VVETLLGEGF RRAPPPAGFP ADVLDARGDL LTLPSRHGTD GFYAARLVRD VPSTD
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