Gene A2cp1_4103 details

Gene Information

• Locus tag: A2cp1_4103
• ID: 7297528
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: +
• Start bp: 4588984
• End bp: 4589568
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 82%
• IMG OID: 643596910
• Product: 2'-5' RNA ligase
• Protein accession: YP_002494487
• Protein GI: 220919183
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1514] 2'-5' RNA ligase
• TIGRFAM ID: [TIGR02258] 2'-5' RNA ligase

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTCACCC GCCGCCTGTT CGTGGCCCTC GAGCCCGCCG ACGCCGTGCG ACGCCGCATC 
GGCGCCGCGT CGGACGCGCT CCGCGCGGCG GCCGGGCGCG CGGCCGGCGA CGTCCGCTGG 
GTGGCGCCCG ACGGCGTGCA CCTGACCTTG CAGTTCCTGG GGGCGGTGCC CGAGGAGCGG 
GTGGAGGCGG TGCGCGCCGC GGTCGAGGCG GCCGCCGCCG GCGCCCGGCC CATGGCGCTC 
GAGGTGAGCG GCGCGGGCGG CTTCCCCAAC GCGCGCCGCC CGCGGGTGGT CTGGCTCGGG 
CTCGGCGGCG ACGTGGCCGC GCTGTCGGCG CTGGTGGCCG ACCTCGGCGC CCGGCTCGCG 
CCGCTCGGCT TCGCGCCCGA GTCGCGCCCG TTCTCGCCGC ACCTCACGCT GGGCCGCGCG 
CGGGATCCGC GCGGCGCCCC GGGGCTCGGC GGCGCGCTCG CCGCGCAGGC GCACGCCGAC 
GGCTTCGGCT GGCGCGCGAC CGAGCTGGTG CTGTTCGAAT CGCACCTCTC GCCGAGGGGC 
GCCCGCTACG AGGCCGTGCT GCGCGCCCCG CTCGGCGGCG GGTAG 

 

Protein sequence

MVTRRLFVAL EPADAVRRRI GAASDALRAA AGRAAGDVRW VAPDGVHLTL QFLGAVPEER 
VEAVRAAVEA AAAGARPMAL EVSGAGGFPN ARRPRVVWLG LGGDVAALSA LVADLGARLA 
PLGFAPESRP FSPHLTLGRA RDPRGAPGLG GALAAQAHAD GFGWRATELV LFESHLSPRG 
ARYEAVLRAP LGGG