Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_4076 |
Symbol | |
ID | 7297501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 4555636 |
End bp | 4556859 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643596883 |
Product | HNH endonuclease |
Protein accession | YP_002494460 |
Protein GI | 220919156 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.39422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAACG CAACCGAGTT CACGAAGCGT CTCGTCGAGC TGCTGCGGTC GGAGCGGCAC GCCATGGCGG AGTTCCTGGT CGCGCTGGCG GAGTTCGACC GGCGGGCCCT ATGGCGGGAG CGGGGGCACA CCTCGCTCTT TTCGTTCCTC CGGCGCGAGC TGGGGCTGTC CGCCGGCGCG GCGCAGTACC GGAAGACGGC GGCGGAGCTC ATCCAGCGGT ACCCGGCGGT GGACGGCGCG CTCCGGGAGG GCAAGCTGTG CCTGTCCTCG GTCTGCGAGC TGGCGAAGGT GGTGACCACC GAGAATTTCG CGGAGATCCT GCCGCGGTTC TACGGGCTGT CGAGCCGGGA TGCGGCGGAG GTGGCTGCGT CGATCCGGCC GGTGGAGAAT CCGCCGCGGC GCGAGGTCGT CGTGCCGGTC CGGTCGGTCT CTGTGCCGTC GGCGGTGACG GTGCCTGCTG CGGAGCCGAT TCTATTTCGG GCGCCCGAAC TGAATGTACC CAGCAGGGTC GAGACCTCTC ACTCAGAGGT CGCTCGCACT GAGCCTGAGT CCGCTCGCAG CGAGCCTGTC GACCTGCGGG CGGCGACGCC TGTCCCGAAG CCCAGCTCCA TCGACTGGCT CGACGGCGAT CAGGCGCGGA TGCACCTCAC CGTGTCCAAG GCCTTCCTGA AGAAGCTCGA GGCGGCTCGG GATGCGCTCT CGCACTCCAT GCCCGGTGCC ACCCGCGAGA ACGTCCTCGA GGCGGCGCTC GACCTGCTCC TCGTCGAACG CGACCGGCGC AAGGGGCTCA CGGCTCGGCC GCAGAAGACG CCTCGTCCCT CCACGCGGCC GGACCACATC CCGGCCCACG TGCGCCGCGA GGTCTGGGCC CGCGACTGCG GGCGGTGCAC CTTCGTCCTC GCCTCGGGCG AGCCGTGCGG GTCCACGCAC CGGCTCGAGC TCGATCACAT CGTCCCGCGA GCACGCGGCG GGGGCTCGAC GGCGGACAAC CTCCGCATCC GTTGCCGGGG GCACAACCTC GAGGAGGCGC GGCGGGTGTT CGGGAACGCG CTCGTGGACG CGTATGCGGG CGCGGGCGGC GGCGGCGGGG CGCCGCTACT CGGAGCCGCG GCGGCTCACA GGCTCACGCG CAGCGCCACG CCGGCGTCCA GCACGGGCGC CTTGCCGAGC CGCGGATCGG GCGAGGCGCC GAGGAACGCG GCGGCGCCGG CGGGGACCTC GTAG
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Protein sequence | MDNATEFTKR LVELLRSERH AMAEFLVALA EFDRRALWRE RGHTSLFSFL RRELGLSAGA AQYRKTAAEL IQRYPAVDGA LREGKLCLSS VCELAKVVTT ENFAEILPRF YGLSSRDAAE VAASIRPVEN PPRREVVVPV RSVSVPSAVT VPAAEPILFR APELNVPSRV ETSHSEVART EPESARSEPV DLRAATPVPK PSSIDWLDGD QARMHLTVSK AFLKKLEAAR DALSHSMPGA TRENVLEAAL DLLLVERDRR KGLTARPQKT PRPSTRPDHI PAHVRREVWA RDCGRCTFVL ASGEPCGSTH RLELDHIVPR ARGGGSTADN LRIRCRGHNL EEARRVFGNA LVDAYAGAGG GGGAPLLGAA AAHRLTRSAT PASSTGALPS RGSGEAPRNA AAPAGTS
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