Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_4018 |
Symbol | |
ID | 7297360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 4475365 |
End bp | 4476306 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643596826 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002494403 |
Protein GI | 220919099 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00745227 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTCGA TGAGCACGAC CTCGAATCCG GCGGAGCGCT TCGAGCCGCA CCGCGGCCGC CTGCTCGGCC TCGCCTACCG CATGCTCGGC TCGATGGCCG ACGCCACCGA CGCGGTGCAG GAGACCTACC TGCGCTGGCA CGCGGCCGAG CGCGAGGAGG TGGAGGACGC GCGCGCGTTC CTCATCACCA CGACGACGCG CATCTGCCTC GACCTGCTGA CCTCAGCGCG CGCACGGCGC GAGGCGTACG TCGGTCCATG GCTCCCGGAG CCGGTCCTCG ACACGGCGGC GCTCGCGCCG GACGCGCACA CCGAGCTCGC CGAGGATCTG TCGGTCGCGT TGCTCCTGAC GCTCGACCGG CTGTCGCCGC TCGAGCGCAG CGCCTTCCTG CTGCACGACG TGTTCGACCT GTCGTTCGCC GAGATCGCCC GGGCGCTGGA GCGAAGCGAG GCTGCGTGCC GGCAGCTCGC CTCCCGCGCC CGGGCGCGCG TTCGCGCGGC ACGACCGCGC GTCGCGACCG AGCCGGCGGC GCCTCCAGGC ACGGTGGACT CGAAGCACGC GCAGCTCATG GCCGCGTTCG CGGCCGCGGC GCAGGCGGGC GACGTGGATG CGCTGATGCG GCTGCTCGCG GCGGACGTGC GCGTGGTGAC GGACGGCGGC GGCAAGGTGC CGGCGGCGCT GGACGTGGTC GAGGGCGCCG ACCGCGCGGC GCGCTTCCTG GTCGGGGCCA CGCGCAAGCG CCCGGGCCAG TGGTGGCGCG AGGACTTCAC GGTGCGCTTC GCGATCGTGA ACGGCCTGCC GGGCGTGGTG GTGGACGGCT CGGACGGACC GGTGCAGACG TCGGCGTTCG AGATCGAGGA CGGCGTCATC CGGGCGCTCT ACGTCGTCCG GAATCCGGAC AAGCTGCGGC ACCTGGCGGG CGCGGCTGCG CCGGGCACCT GA
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Protein sequence | MSSMSTTSNP AERFEPHRGR LLGLAYRMLG SMADATDAVQ ETYLRWHAAE REEVEDARAF LITTTTRICL DLLTSARARR EAYVGPWLPE PVLDTAALAP DAHTELAEDL SVALLLTLDR LSPLERSAFL LHDVFDLSFA EIARALERSE AACRQLASRA RARVRAARPR VATEPAAPPG TVDSKHAQLM AAFAAAAQAG DVDALMRLLA ADVRVVTDGG GKVPAALDVV EGADRAARFL VGATRKRPGQ WWREDFTVRF AIVNGLPGVV VDGSDGPVQT SAFEIEDGVI RALYVVRNPD KLRHLAGAAA PGT
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