| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3955 |
|---|
| Symbol | |
|---|
| ID | 7297295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 4408788 |
|---|
| End bp | 4409468 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643596764 |
|---|
| Product | haloacid dehalogenase, type II |
|---|
| Protein accession | YP_002494344 |
|---|
| Protein GI | 220919040 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTCG CCCCGGTCCG CGCCGCCGTC TTCGACGCTT ACGGAACCCT GTTCGACGTG
GCCAGCGCCG CCGCCGAGGC GCGCGGCGCG CTCGGCGACC GCTGGCAGCC GCTCGCCGAG
CTGTGGCGAT CGAAGCAGCT CCAGTACACC TGGCTCCGCA GCCTGGCCGG CCGCCACGCC
GACTTCTGGC AGGTGACCGG CGACGCGGTC GACTTCGCGC TCGAGGCGCT CGGCCTCGCC
GACGCGGCGC TGCGCGCGCG GCTGATGGAG TCCTACCGCC ACCTCGCCGC GTACCCCGAG
GCGAAGGACG TCCTCACGCG CCTGCGCGGC GCCGGCGTGC GCCTGGCGGT GCTCTCGAAC
GGTGCGCCGG CCATGCTCGC GTCCGCGGCG GAGAGCGCCG GGCTCGCCGG CCTGCTCGAG
CAGGTCCTCT CGGTGGAGGA CGTGGGCGTG TACAAGCCGC ACCCGGCCGT CTACCGGCTG
GCCGTGGACC GCCTCGGCGT GCCTGCGGCG GAGATCGTGT TCGTCTCCTC GAACGGCTGG
GACGCGTTCG GCGCGAAGGC GTTCGGCTAC CAGGTGGCCT GGTGCAACCG CGCCGGCCAG
CCCGCGGAGC GGCTCCCCGC CGCCCCCGAC GCCGAGATCC GCTCGCTCGC CGAGCTGCCG
CCGCTGCTGG GCCTGCCGTA G
|
|---|
| Protein sequence | MALAPVRAAV FDAYGTLFDV ASAAAEARGA LGDRWQPLAE LWRSKQLQYT WLRSLAGRHA
DFWQVTGDAV DFALEALGLA DAALRARLME SYRHLAAYPE AKDVLTRLRG AGVRLAVLSN
GAPAMLASAA ESAGLAGLLE QVLSVEDVGV YKPHPAVYRL AVDRLGVPAA EIVFVSSNGW
DAFGAKAFGY QVAWCNRAGQ PAERLPAAPD AEIRSLAELP PLLGLP
|
|---|
| |