Gene A2cp1_3796 details

Gene Information

• Locus tag: A2cp1_3796
• ID: 7296172
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-1
• Kingdom: Bacteria
• Replicon accession: NC_011891
• Strand: +
• Start bp: 4216959
• End bp: 4218923
• Gene Length: 1965 bp
• Protein Length: 654 aa
• Translation table: 11
• GC content: 78%
• IMG OID: 643596606
• Product: NADH dehydrogenase (quinone)
• Protein accession: YP_002494186
• Protein GI: 220918882
• COG category: [C] Energy production and conversion; [P] Inorganic ion transport and metabolism
• COG ID: [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.273036
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCTCCG CGCTCGCCCT CGGCGCCATC GCCCTCACCG CCGCGAGCGG CCTCGCCGCG 
GCGCTGCCCG GCCTCCGCCC CGCGCGCGCG CAGGCGCTCG CCACCGCGGT GCTCTGCGCC 
GGCGCGGCGC TGGGCCTCGC CGCGGCGGGC GTGGCGCTGG CGGGGGGCGA GGCGGCGGCG 
GGCGGGGTGC TGCGGGTGGA CGCGCTCTCC GGGCTGTTCC TCGTGCCCAT CCTCGGCATC 
GCCGCGGCGG GCTCGGCATA CGGGCTGCGC TACTTCCCGC AGGCGGAGCG CGGCGCGCGC 
GCGGTGCGGC TGCAGCTCTT CTACGGCCTC GCGGTCGCCG GGATGGCGCT GCTCGTGTGC 
GCCCCCGACG CCATCGGCTT CCTCGTCGGC TGGGAGGTGA TGGCGCTCGC GAACTTCTTC 
ATGGTGCAGA CCGAGGACGA GGACCCGTCG GTGCGCCGCG GCGCGTTCCT GTACCTCGCC 
GCCACGCACG CCGGCACCCT GGCGCTGTTC GCGCTGTTCG CGCTGCTGCG CCGCGAGGCG 
GGCACGTTCG AGCTCGCGGC CATGGAGGGC CTCCGGCTCT CCGGCCCCAC GGCGGCCGCG 
GTGCTGGCGC TGGCGCTGGC CGGCTTCGGC ATGAAGGCCG GGCTCGTGCC GCTCCACTTC 
TGGCTGCCCC CGGCGCACGC GGCCGCGCCC AGCCACGTGT CCGCGCTCAT GTCCGGGGTG 
GTGGTGAAGA CCGGCATCTA CGGGCTGATG CGGGTGACCG GCCTGGTGGA GTCGCCGCCC 
GAGTCGTGGG GCGTCGCGCT GCTCGCGCTG GGCGGCGTCT CGGCGGTGCT GGGCGTGGCG 
TTCGCGCTCG CGCAGCACGA CCTGAAGCGG CTGCTCGCCT ACCACACCGT GGAGAACGTG 
GGGATCATCG CGCTCGGGCT CGGGCTGGCG CTGCTCGGGC GCGCCCGCGG CGTCCCGGCG 
CTGGTGGTCC TCGGCCTGGG CGGCGCCGGC CTGCACGTCG TCAACCACGC GCTGTTCAAG 
TCGCTCCTGT TCCTCGGCGC CGGCGCCGTA CACCACGCCA CCGGCACGCG CGACCTCGAC 
CACCTGGGCG GCCTCGCGCG CGCCATGCCG CGGACGGCGC TGCTGTTCGT GGTCGGCGCC 
GCGGCCATCA GCGGGCTCCC GCCGCTGAAC GGCTTCGCCT CGGAGTGGCT GGTCTACCTG 
GGCCTGCTCG ACGGCCTGCG CCAGCCCGGG GGCGACCTGC TCGCGTACGT GACGCTGGGC 
GCGCCGGCGC TGGCGCTGGT GGGCGGCCTG GCCGCGGCCT GCTTCGCGAA GGTGGTCGGG 
GTGGTGTTCC TGGGCAGCCC GCGCAGCCAC CACGCCGACG GCGCGCACGA GCCGCCCGCG 
GCCATGCTCG CGCCCATGGC GCTCCTCGCC GCCGCCTGCG CCGCCATCGG CCTGTTCCCG 
GCCGCGACCA CCGCGCCGCT CGCCCGCGCC GCGGCCGCCT GGGCCCGCGT CGATCCCGCG 
CTGCTCGCCG CCCCCGCCGC GCGCGCGGCC GCCGGCGCCG CGCGGGTGAG CGCGGTCGCC 
GCGGTCCTGC TCGTGGCGAC GCTGGCGGTG GCGGCGTGGC GGCGGCGCCG GCTGGCCGGC 
CGCATCGCGC CCGCCGTGCA GACCTGGGGC TGCGCCTTCT CCGCGCCGAC CGCCCGCATG 
CAGTACACCG GCTCGTCGCT CGCCGCGCTG CTGGTGGCGC GCTTCTCCTG GGCGGTCCAC 
CCGCGGCGCA CCGAGCCGCG GCTGGAGGGG CCGTTCCCGG CGCCGGCGCC GTTCGCCACC 
ACGGTGCCGG ACACCGTCCT CGACCTCGCC CTCCTCCCGG CGGCGCGCGC GTACGGCTGG 
ATCGCCGAGC GCGCGCGCCT CCTCTACCTC CGCAGGATCC ACTTCCAGAT GCTGCTCGTG 
CTCGTGACGC TCCTCGCCGT CCTCGCCTGG GGGTTCGCGT GGTGA 

 

Protein sequence

MTSALALGAI ALTAASGLAA ALPGLRPARA QALATAVLCA GAALGLAAAG VALAGGEAAA 
GGVLRVDALS GLFLVPILGI AAAGSAYGLR YFPQAERGAR AVRLQLFYGL AVAGMALLVC 
APDAIGFLVG WEVMALANFF MVQTEDEDPS VRRGAFLYLA ATHAGTLALF ALFALLRREA 
GTFELAAMEG LRLSGPTAAA VLALALAGFG MKAGLVPLHF WLPPAHAAAP SHVSALMSGV 
VVKTGIYGLM RVTGLVESPP ESWGVALLAL GGVSAVLGVA FALAQHDLKR LLAYHTVENV 
GIIALGLGLA LLGRARGVPA LVVLGLGGAG LHVVNHALFK SLLFLGAGAV HHATGTRDLD 
HLGGLARAMP RTALLFVVGA AAISGLPPLN GFASEWLVYL GLLDGLRQPG GDLLAYVTLG 
APALALVGGL AAACFAKVVG VVFLGSPRSH HADGAHEPPA AMLAPMALLA AACAAIGLFP 
AATTAPLARA AAAWARVDPA LLAAPAARAA AGAARVSAVA AVLLVATLAV AAWRRRRLAG 
RIAPAVQTWG CAFSAPTARM QYTGSSLAAL LVARFSWAVH PRRTEPRLEG PFPAPAPFAT 
TVPDTVLDLA LLPAARAYGW IAERARLLYL RRIHFQMLLV LVTLLAVLAW GFAW