Gene A2cp1_3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_3794 
Symbol 
ID7296170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp4214270 
End bp4214965 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content75% 
IMG OID643596604 
Productputative PTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_002494184 
Protein GI220918880 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0123401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTCA CCGAACGCGA CGCGGCCCGC CTCCTCGGCG TCCCCGAGGC CACCCTGCAG 
CGGTGGCTGA GGAGCGGCGA GCTCGCCGCC ACCCGGCTGA ACGAGCAGTA CCGGCTGAAC
AAGATCGACC TGCTCGAGTT CGCCTCCTCG CGCGGGATGG AGATCTCGCC CGACCTGCTC
GCCGAGCTGG AGCAGCCGGC GCTGCCGAGC CTGGCCGAGG CGATCCGCGC CGGCGGCGTG
CACCACGGGC TGGCCGGCGC CGACAAGTCG GCCACGCTGC GCGACCTGGT GGACCGGCTG
GCGCTGCCGC GCGAGGCCGA CCGCGACCTG GTGCACCGGA TGCTGCTCGC GCGCGAGGCG
CTCGGCTCCA CCGGCGTGGG GAACGGCATC GCCATCCCGC ACGCGCGGAA CCCCATCGTC
CTGCACGTGT CCACGCCCGC GGTGGCCATC AGCTACCTCG ACCGGCCGGT GGACTTCGAG
GCGCTGGACG GGAAGCCGGT GCACACGCTC GTGCTGCTGG TGAGCCCGTC CACCCGCGCG
CACCTGCACC TGCTCGCGCT GGTGGCCACC GCGCTGCGGG ATCCCGGCGT GCTCGCCGCG
CTGGACGCGC GCGCCGGAGT GGACGCGCTC GTCCCCGAGA TCGAGCGGGT GGAGGCCGCC
ATCGCGGAGA AGCGCGCGGC GGCGAGGAGG CCATGA
 
Protein sequence
MQLTERDAAR LLGVPEATLQ RWLRSGELAA TRLNEQYRLN KIDLLEFASS RGMEISPDLL 
AELEQPALPS LAEAIRAGGV HHGLAGADKS ATLRDLVDRL ALPREADRDL VHRMLLAREA
LGSTGVGNGI AIPHARNPIV LHVSTPAVAI SYLDRPVDFE ALDGKPVHTL VLLVSPSTRA
HLHLLALVAT ALRDPGVLAA LDARAGVDAL VPEIERVEAA IAEKRAAARR P