| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3786 |
|---|
| Symbol | |
|---|
| ID | 7296162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 4205582 |
|---|
| End bp | 4206742 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 643596596 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_002494176 |
|---|
| Protein GI | 220918872 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.432228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTCC GCCTCTCCCC CGCTCGCGCG CTCCTGCCGG CGCTCCTGGT GACCGCGTGC
GCCGCCGGCG GCCAGCTCCG GGCCGACGTG CGCGCGGTCC GGGCCGAGCT GGTGGAGGCC
CGCGGCGCGG GGGCCGAGCG CTGCGCCGCG GACGAGCTGT CCGACGCGGA GGCGAGCCTG
GAAGAGGCCG AGCGGCGGCT GGGGCGGGGC GAGGACGCGG CGGCCCGCGC CCGGGTGGAG
GCCGCCGGGC GCAGCGCCCG GCGCGCGCGG GAGCTGGCCC GGACCTGCGC CGCCCCGCAG
GTCACCATCC GCAAGGGCGA GCCCGCGGCG CGGGTGATCA TCGAGAAGAC CGACGGCGAC
CGTGACGGCG TCCCGGACCT GGACGACCGC TGCCCCGATG CGCCCGGCCC GTCCACGCTC
CAGGGGTGCC CGGACGCGGA CGGCGACGGC ATCGGCGACG CCGAGGACGC GTGTCCGGCG
GAGGCGGGGC CGGCCGAGAC GCTCGGGTGC CCGCCGGCGA AGGACTCCGA TGGCGACGGC
GTCCCCGACG AGATCGACCG GTGCCCGCTC GATCCCGAGG ACGCCGACGG GTTCCAGGAG
GAGGACGGCT GCCCGGATCC GGACGACGAC GGTGACGGCA TCGTGGACCG CGTGGACGCC
TGCCCGCACG ACCAGGGGCC GCTCGAGAAC CGCGGCTGCC CCGTGATGGA CGCGGACGGC
GACGGGGTGG CCGACCCGGA CGATCGCTGC CCCGAGCAGG CCGGCGTCGC CGCCGACGGG
TGCCCGCGGG CGTACCGGCT CCTCGAGGTG GGGCGGGACC GGATCGCGCT GCGCGAGCCG
GTGCGCTTCG GCGCGCGCGA CGACCTGCTG CCGTCGAGCG CGGTCCTGCT CGACGAGCTG
GCGCAGGCGC TGCGCGACCG CCCGCGGCTG CGGGTCGCGG TCGAGGTCCA CACCGACGGC
GCCGGCGAGG CGGCCGCGAG CAAGCGGCTG AGCCAGGCGC GCGCCGAGGC GGTGCGGGCG
GCGCTGGCCG GGCGCGGGAT CGAGGCGGAG CGGGTGGAGG CGAAGGGGTT CGGGGCCGAG
CACCCCATCG CCTCCAACAA GACGGCGCGC GGGCGCGCCC AGAACCGGCG CACCGAGATC
AGGATCCTCC CCGGCGGGTG A
|
|---|
| Protein sequence | MSLRLSPARA LLPALLVTAC AAGGQLRADV RAVRAELVEA RGAGAERCAA DELSDAEASL
EEAERRLGRG EDAAARARVE AAGRSARRAR ELARTCAAPQ VTIRKGEPAA RVIIEKTDGD
RDGVPDLDDR CPDAPGPSTL QGCPDADGDG IGDAEDACPA EAGPAETLGC PPAKDSDGDG
VPDEIDRCPL DPEDADGFQE EDGCPDPDDD GDGIVDRVDA CPHDQGPLEN RGCPVMDADG
DGVADPDDRC PEQAGVAADG CPRAYRLLEV GRDRIALREP VRFGARDDLL PSSAVLLDEL
AQALRDRPRL RVAVEVHTDG AGEAAASKRL SQARAEAVRA ALAGRGIEAE RVEAKGFGAE
HPIASNKTAR GRAQNRRTEI RILPGG
|
|---|
| |