| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3708 |
|---|
| Symbol | |
|---|
| ID | 7296080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 4128185 |
|---|
| End bp | 4128757 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643596518 |
|---|
| Product | orotate phosphoribosyltransferase |
|---|
| Protein accession | YP_002494100 |
|---|
| Protein GI | 220918796 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.684552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGG AACGGGATCG CGCGCGGCTG CTCGAGCTCC TGCGCAGCCT GTCGTTCGAG
CGCCGCAAGG TGGTCCTCGC CTCCGGCAAG GAGAGCGACT TCTACATCGA CTGCAAGCGC
ACCGCGCTCA CCGCCGAGGG GCACGTCCTC ATCGGGCGGC TGCTGCTCGA GCGCGTGCGC
GGCCTCACGC CGCCGGTGCG CGGCGTGGGC GGGCTCACGC TCGGCGCGGA CCCGATCGCG
AGCGCGGTGG CGCTCACCAG CTTCCTCCCC GGCGCCGGCG CCGGTGACCC GGTGGACGCG
TTCATCGTGC GCAAGGAGCC GAAGGGCCAC GGCACCGGCC AGTGGATCGA GGGGCGCAAG
ACCCTCCCCG ACGGCAGCCG GGTGGCGGTG ATCGAGGACG TGGTGACCAC CGGCGGCTCG
GCGCTGAAGG CGATCGAGCG CTGCCGGGCC GAGCACCTGG TCCCGGTGGC GTGCCTGGCG
CTGGTGGACC GGCAGGAGGG CGGGCGCGAG GCCATCGAGG CCCAGGGCGT GCCGCTGCAG
GCGCTGTTCA CCCGCGCGGA CTTCATGTCA TGA
|
|---|
| Protein sequence | MSLERDRARL LELLRSLSFE RRKVVLASGK ESDFYIDCKR TALTAEGHVL IGRLLLERVR
GLTPPVRGVG GLTLGADPIA SAVALTSFLP GAGAGDPVDA FIVRKEPKGH GTGQWIEGRK
TLPDGSRVAV IEDVVTTGGS ALKAIERCRA EHLVPVACLA LVDRQEGGRE AIEAQGVPLQ
ALFTRADFMS
|
|---|
| |