| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3542 |
|---|
| Symbol | |
|---|
| ID | 7299592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 3959578 |
|---|
| End bp | 3960543 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 643596355 |
|---|
| Product | peptidase U61 LD-carboxypeptidase A |
|---|
| Protein accession | YP_002493938 |
|---|
| Protein GI | 220918634 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCTCC CCCCGCTGCT GCGCCGCGGC GACCCCGTCC GCGTCATCGC GCCGTCGAGC
CCCTTCGAGC CGGAGCTGCT CGCCCGCGGC GTGGCCGTCC TCCGCGACCG GCTCGGGCTC
GAGCCGCGCA TGCGCGCCGA CCTGGGGGCG CGGGCGCGCT ACCTCGCCGG CGACGACGCC
CGGCGGCTGG AGGAGTGGCG CGAGGCGGTC GCGGACCCGG ACGCACGGGC GATCTTCTGC
GCGCGCGGCG GGTTCGGGGC GAGCCGGCTG CTCCCCGAGG TGGACCCGGC GCCCCTGCTC
GAGCGGCCCA AGGTGCTGGT GGGCTTCTCC GACGTGTGCG CGCTGCACGC CGCGCTCAAC
CGCGCCGGCC TCGCCACCGT CCACGGCCCG GTGCTGACGC AGCTCGGCCG GGCGCCGGAG
GCCGCGGTCG CGCAGCTCGA GGCCCTGCTG CTGGGAGGCG CGCCGCGCCC GGATCCGTGG
GCGCCGCCCG CGGCGGGGGC CGGGCTGCCC GGGACGGCCA CGGTGAGGGC GGGCCGCGCG
GCGGGGCCGC TGCTCGGCGG CTCGCTGACC CTGCTGGCGC ACCTGTGCGG CACGCCGTTC
GCGCCGCGGC TGGACGGCGC GCTGCTCCTG CTCGAGGACG TGGGGGAGAA GCCGTACCGC
CTCGATCGCT ACCTGACGCA GCTCCGGCTG GCCGGCGCGC TGGACGGGGT GGCGGGGGTG
GCGCTGGGTC ATTTCACGGA ATGTGACGCC GCGGGGGTGC GCGGCGCCGA CGTGGTCCGG
GAGCGGGTCG CGGGCCTCGG GGTGCCGGTG GCGGAGGGCT TCCCGGTGGG ACACGAGGAC
GCGAACTTCT CGGTCCCGCT CGGCGCCCGG GCGACGCTGG TCGCGCCCGG GCCCGGCGAG
GAGGGCGCGC CGCGGCTGCT GTTCGACGGC TGGTGGGCCC GCGAAGGCGA GGGCGCCGCC
CGGTGA
|
|---|
| Protein sequence | MRLPPLLRRG DPVRVIAPSS PFEPELLARG VAVLRDRLGL EPRMRADLGA RARYLAGDDA
RRLEEWREAV ADPDARAIFC ARGGFGASRL LPEVDPAPLL ERPKVLVGFS DVCALHAALN
RAGLATVHGP VLTQLGRAPE AAVAQLEALL LGGAPRPDPW APPAAGAGLP GTATVRAGRA
AGPLLGGSLT LLAHLCGTPF APRLDGALLL LEDVGEKPYR LDRYLTQLRL AGALDGVAGV
ALGHFTECDA AGVRGADVVR ERVAGLGVPV AEGFPVGHED ANFSVPLGAR ATLVAPGPGE
EGAPRLLFDG WWAREGEGAA R
|
|---|
| |