| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3528 |
|---|
| Symbol | |
|---|
| ID | 7299578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 3941628 |
|---|
| End bp | 3944477 |
|---|
| Gene Length | 2850 bp |
|---|
| Protein Length | 949 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643596341 |
|---|
| Product | peptidase M16 domain protein |
|---|
| Protein accession | YP_002493924 |
|---|
| Protein GI | 220918620 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.146206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACAC GCACCCTCGC CTCCCTCGCC CTCGCCGGCA TCGCAGCCCT GGCCGCCATG
CCCTCGCCGG CCGCCGCCGC CCCAGCCGCT CCCGCCGCCG TGCGCCTGCC GGAGATCCCG
GACCTGCCGT ACGTGAAGAG CGTGCTGCCG AACGGCCTCA CGCTCATCGT CCACGAGGAC
CACAAGGCGC CCATCGTGGC GGTGAACGTC TGGTACCACG TCGGCTCCAA GAACGAGCGG
CCGGGCAAGA CCGGATTCGC GCACCTCTTC GAGCACCTGA TGTTCAACGG CTCGGAGCAC
TTCGACGACG ACTGGTTCAA GGTGCTGGAG CGCGTCGGCG CCACCGACCT GAACGGCACC
ACCAACAACG ACCGGACCAA CTACTTCCAG AACGTGCCGG TGTCGGCGCT CGACACCGTG
CTGTGGATGG AGTCCGACCG CATGGGCCAC CTGCTCGGCG CCATCACGCA GGCGCGCCTC
GACGAGCAGC GCGGGGTCGT CCAGAACGAG AAGCGGCAGG GCGAGAACCA GCCGTACGGG
CGCGTGTACG ACGTGATGAC GCCCTCGCTC TACCCGAAGG CGCACCCGTA CTCCTGGACG
GTGATCGGCT CCATGGAGGA CCTGGGGGCC GCCTCGCTCG ACGACGTGAA GGAGTGGTTC
CGCGGCTACT ACGGCGCGAG CAACGCGGTG CTGGTGGTGG CGGGCGACGT GAAGCCCGAC
GAGGTCCGCA AGAAGGTCGA GCACTACTTC GGCGACGTGC CGCCGGGCGA GCCCATCGCC
AAGCAGCAGG CCTGGATCGC GAAGCGCACC GGCGAGCAGC GCCAGGTGAT GCAGGACCGC
GTGCCGCAGG CGCGCGCCTA CCTGGTGTGG AACACGCCGG AGTGGGGCCA CCCGGACGAC
GACCTGCTCA CGGTGGCGGC CCGGGTGCTC GCGTCGGGCA AGAGCTCGCG GCTCTACAAG
CGGCTCGTCT ACGACGAGCG GATCGCCACC GACGTGAGCG CCGATCCGGG CACCAGCGAG
ATCGGCTCGA CGTTCTTCAT CGAGGCGACC GCGAAGCCCG GTGGCGACCT CGCCAGGGTC
GAGCGCGCGG TGCGCGAGGA GGTGGCGCGG CTCGTGGCGC AGGGCCCCAC CGCCGAGGAG
CTGGTGCGGG CGAAGACCGG CATCCTGTCC GAGTTCGTGC GCGGCGTGGA GCGCATCGGC
GGCTTCGGCG GCGTCTCCGA CGTGCTCGCC GAGAACCAGG TCTACGGCGG GACGCCGGAC
GCCTACCGCA CCCGGCTCGG GCGCATCCGC TCGGCCACCG CCGCCCAGGT CCGGGACGCC
TGCCGCCGCT GGCTGTCAGA CGGCGTCTAC GTGCTGTCGG TGCTGCCGTT CCCCGAGCTG
CAGGCCGCCG CCACCGGCGC GGATCGCAAG GTGCGGCCCG AGCCCGGGCC GGCGCCGGCG
CCCCGGTTCC CGGCGTTCAC GCGGCACCAG CTCTCCAACG GCCTGAAGGT CGTGGTGGCC
GAGCGCCACG CGGTCCCGGA CGTGCAGCTC GACCTGCTGG TGGACGCGGG CTACGCCTCC
GACCAGCACG GCGCGCCCGG GCTCGCGAAG CTGGCGACGG CCATGCTGGA CGAGGGCACC
CGCTCGCGCT CGGCGCTGGA GATCTCCGAC ACCCTGCAGC GGCTGGGGGC GCGCCTCGAC
ACCGGCGCGG ACCTCGACAC CTCGCTGGTC AGCATGGCGG CGCTGCGCGC GAACCTCGAC
GCGTCGCTGG CGCTGTTCGC CGACGTGGTG GTGAACCCGG TGTTCCCGGA GGCCGACTTC
GAGCGGCTGA AGGCGCAGCA GCTCGCCGGC CTCGGCCAGG AGGCGGTGCA GCCGGTGACG
GCGGCGTTCC GCATCCTGCC GCGCCTGCTG TATGGCGAGG GGCACGCCTA CTCGAACCCG
CTCACCGGCT CCGGCACCGC GGCCACCGTC GGCAAGCTCT CCCGCGCGGA CGCGGCCCGC
TGGCACGCGA CCTGGGTGAA GCCGAACAAC GCCACGCTGG TGGTGGTGGG CGACACCACC
GCCGCGGAGA TCGTGCCGAA GCTGGAGCGG CTGCTGGGCG GCTGGAAGGC GGGCGAGGTC
CCGAAGAAGA ACCTGGCGCA GGTGGCGCTG CCGGCCGGGC AGCGCGTGTT CCTCCTCGAT
CGGCCAGGGT CGATCCAGTC GGTGGTGATC GCCGGGCAGG TCGCCCCGCC GCGGGCGAAC
CCCGCGGAGA TCGCGCAGAC CGCCATGAAC ACCGTGCTGG GCGGCGCGTT CACCTCGCGG
CTCAACATGA ACCTGCGCGA GGACAAGCAC TGGTCCTACG GCGCCCGCGC GCTGCTCACC
GACGCCCGCG GCCAGCGGCC GTTCTTCGCG CTCGCGCCGG TGCAGGCCGA CAAGACCAAG
GAGACGGTGC TGGAGATCCG CAAGGAGCTG GCCGGCATCC GCGGGGCGAA GCCCGTCACC
GCCGAGGAGG CGGCGGTGGC GCGGGGCACG CTGACCTTGT CGCTGCCGGG CCGCTGGGAG
ACGTCGCGGG CGGTGGCGCG GTCCATCGCG CAGATCGTCC GCTTCGGCTT CGACGATCGC
TACTTCGACG GCTTCGCGCA GAAGGTGGCC GCGCTCGGCC CGAAGGACCT CACCGACGCG
GCCCGCATGG TGGAGCCGGA CCGCGTCACC TGGGTCATCA TCGGCGACCG CGCCAAGATC
GAGCCCGGCC TGCGCGAGAT CGGCCTCGGC GAGGTCCAGC TCGTGGACGC CGACGGCAAC
GTGAAGCCGG GGACGGTATC TGACGGGGCT GCGCCCCGCC CCACGGAGCG GAGCTCCGCG
GGGCCCCACC CGGCTGCGCG GGGCCCGTGA
|
|---|
| Protein sequence | MPTRTLASLA LAGIAALAAM PSPAAAAPAA PAAVRLPEIP DLPYVKSVLP NGLTLIVHED
HKAPIVAVNV WYHVGSKNER PGKTGFAHLF EHLMFNGSEH FDDDWFKVLE RVGATDLNGT
TNNDRTNYFQ NVPVSALDTV LWMESDRMGH LLGAITQARL DEQRGVVQNE KRQGENQPYG
RVYDVMTPSL YPKAHPYSWT VIGSMEDLGA ASLDDVKEWF RGYYGASNAV LVVAGDVKPD
EVRKKVEHYF GDVPPGEPIA KQQAWIAKRT GEQRQVMQDR VPQARAYLVW NTPEWGHPDD
DLLTVAARVL ASGKSSRLYK RLVYDERIAT DVSADPGTSE IGSTFFIEAT AKPGGDLARV
ERAVREEVAR LVAQGPTAEE LVRAKTGILS EFVRGVERIG GFGGVSDVLA ENQVYGGTPD
AYRTRLGRIR SATAAQVRDA CRRWLSDGVY VLSVLPFPEL QAAATGADRK VRPEPGPAPA
PRFPAFTRHQ LSNGLKVVVA ERHAVPDVQL DLLVDAGYAS DQHGAPGLAK LATAMLDEGT
RSRSALEISD TLQRLGARLD TGADLDTSLV SMAALRANLD ASLALFADVV VNPVFPEADF
ERLKAQQLAG LGQEAVQPVT AAFRILPRLL YGEGHAYSNP LTGSGTAATV GKLSRADAAR
WHATWVKPNN ATLVVVGDTT AAEIVPKLER LLGGWKAGEV PKKNLAQVAL PAGQRVFLLD
RPGSIQSVVI AGQVAPPRAN PAEIAQTAMN TVLGGAFTSR LNMNLREDKH WSYGARALLT
DARGQRPFFA LAPVQADKTK ETVLEIRKEL AGIRGAKPVT AEEAAVARGT LTLSLPGRWE
TSRAVARSIA QIVRFGFDDR YFDGFAQKVA ALGPKDLTDA ARMVEPDRVT WVIIGDRAKI
EPGLREIGLG EVQLVDADGN VKPGTVSDGA APRPTERSSA GPHPAARGP
|
|---|
| |