Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3525 |
Symbol | |
ID | 7299575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 3938738 |
End bp | 3939952 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 643596338 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002493921 |
Protein GI | 220918617 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.63708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCAGGCGC AGCAGGACGA GCGGCGGGGC GCGCCGGCGC GGATCCCCGC CGGCGTGTGG GTGCTGGGCG GCGTGAGCCT GCTCATGGAC GTCTCCTCCG AGATGATCCA CGCGCTGCTG CCGCTGTTCA TGGTGACCGC GCTCGGCGCG GGCGCGCTGA CGGTGGGCGT GATCGAGGGG CTGGCCGAGT CCACCGCGCT GGGGGTGAAG GTGTTCTCGG GCGTGCTGAG CGACGCGCTC GGCCGGCGCA AGGCGCTCGC GGTCGCCGGG TACGCGCTGG GCGCCGCCAC GAAGCCGCTC TTCGCCCTGG CGCCGACGCC GGCGGTGGTG CTCGGGGCGC GCCTGCTGGA TCGGGTCGGC AAGGGCATCC GCGGCGCGCC GCGCGACGCG CTGGTGGCCG ACATCACGCC GCCGGCGCTC CGGGGCGCGG CGTTCGGCCT GCGCCAGGCG CTCGACACGG TGGGCGCGTT CGCGGGCCCG CTCCTCGCCA CGGGCCTGAT GCTGCTGTGG GCGAACGACT TCCGCCGCGT GTTCTGGGTG GCGGTGATCC CGGGCGCGCT GTCGGTGGCG CTGCTCTGGC TCGGGCTGCG CGAGCCCGAG CACCGCGGGG ACGGCCGACG CACGAACCCG ATCCGGCGCG AGAGCCTGCG GCGCCTCGGC CCCCGGTACT GGTGGGTGGT GGGCATCGGC GCGACGTTCA CGCTCGCCCG CTTCAGCGAG GCGTTCCTCG TGCTGCGCGC GCAGCAGGGC GGCGTCCCGC TCGCGCTCGT GCCGCTGGTG ATGGTCGCGA TGAACCTGGT GTACGCGCTG ACCGCCTATC CCTCGGGGCG CCTGTCGGAT CGCGTGAGCC GCAGGGGCCT CCTGGCGGCG GGGCTCGGCG TCCTGGTCGC CGCGGATCTC GTGCTGGCGA TGGAGGGCGG CTGGCCGGTG GTGCTCGCCG GCGTGGCGCT GTGGGGCGTG CACATGGGCA TCACGCAGGG CCTGTTCGCG ACGCTGGTGG CGGACACCGC CCCGCCCGAC CTGCGCGGCA CCGCGTTCGG CGTCTTCAAC CTGCTCGCCG GGATCGCCAC GCTGGTGGCG AGCGTGGTCG CGGGGCTCCT CTGGGAGCGG CTCGGCGCGC CCTTCACGTT CCGCGCGGGG GCCGTGTTCT GCCTGCTCGC GCTGGCGGGG CTCGCCGGGA GGCCGGCGGG GCTCCGGGCG GCGCCGCGCG GCTGA
|
Protein sequence | MQAQQDERRG APARIPAGVW VLGGVSLLMD VSSEMIHALL PLFMVTALGA GALTVGVIEG LAESTALGVK VFSGVLSDAL GRRKALAVAG YALGAATKPL FALAPTPAVV LGARLLDRVG KGIRGAPRDA LVADITPPAL RGAAFGLRQA LDTVGAFAGP LLATGLMLLW ANDFRRVFWV AVIPGALSVA LLWLGLREPE HRGDGRRTNP IRRESLRRLG PRYWWVVGIG ATFTLARFSE AFLVLRAQQG GVPLALVPLV MVAMNLVYAL TAYPSGRLSD RVSRRGLLAA GLGVLVAADL VLAMEGGWPV VLAGVALWGV HMGITQGLFA TLVADTAPPD LRGTAFGVFN LLAGIATLVA SVVAGLLWER LGAPFTFRAG AVFCLLALAG LAGRPAGLRA APRG
|
| |