Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3520 |
Symbol | |
ID | 7299570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 3933994 |
End bp | 3936009 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643596333 |
Product | UvrD/REP helicase |
Protein accession | YP_002493916 |
Protein GI | 220918612 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCGACC TGTCCACCCT CAACCCGCCG CAGCGCGAGG CGGTGATGAC CACCGAGGGC CCGCTGCTGG TGCTCGCGGG CGCGGGCTCG GGCAAGACCC GCGTCATCGC GCACCGCGTC GCCTACCTGC TGGTGCAGGG CGTGGACCCG GAGCAGGTGC TCGCGGTCAC GTTCACCAAC AAGGCCGCGG GCGAGATGCG CGAGCGGGTG GCCGCGCTGG CGGGCCCGCC CGGCGTGGAC GTGTTCGTCT CCACGTTCCA CAGCTTCGGC CTGTGGCTGC TGCAGCAGGA GCACGAGGCG GCCGGGCTGC CCCGCCGCTT CGCCATCTGC GACGCCGGGG ACCAGCTCGC GCTCGTGAAG CGGTGCATGC GCGAGGTGAG CGTGGACGAC CGCAAGTTCG ACGCGCACCG GGTGCTCTCG CTCCTCTCGC GCGCCAAGAA CGCCGGCAAG AAGCGGATCG TGCCGCGGGA GGCGGGGCAG GGCGACGACT ACGACCTCGT CGCCGCCGAG GTGTACCCGC GCTACGAGAA GGCGCTCCGC GCCATGCGCT CGGTGGACTT CGACGACCTC ATCGCCCGGC CGGTGGCGAT GCTGGCGCAC GACCCGGCGC TGCGCGCCCG CTGCCAGGAG CGCTTCCGCT ACCTGCTGGT GGACGAGTAC CAGGACACGA ACGCCGCCCA GCTCGAGCTC TTGAAGCTCC TCGCCGGCGA GCGGCGGAAC GTGTGCGCGG TCGGCGACGA CGACCAGGCC ATCTACGGCT GGCGCGGCGC CGAGGTGAAG AACATCCTGC GGTTCGAGCG GCACTTCCCC GGCGCGAAGG AGGTCCGGCT CGAGCAGAAC TACCGCTCCA CCGGCCACAT CCTCGCCTGC GCGAACGCGG TCATCGCGAA GAACGCGGCG CGCAAGGCGA AGGCGCTGTT CACCGCGGGC GAGGCGGGCG AGCCGGTGCG GGTGGTGGCC ATGTCCGAGG AGGAGGACGA GGCGCGCTTC GTGGCCGAGG AGATCGCCCG GCAGCGCGGC GAGGGCCGGC CGTGGAGCCA CTTCGCGGTG CTGTTCCGCC TCAACGCGCT CTCGCGCCCG TTCGAGGAGG CGTTCCGCGA GGGCTCCATG CCGTACAAGG TGCACGGCGG CCCCGCCTTC TTCGACCGCT CCGAGGTGCG CGACCTGCTC GCGTACCTGA AGCTCTGCGT GCAGCCCGAG GACGACGTGT CGCTCTCGCG CGTCGTGAAC GTGCCGCCGC GCGGGATCGG CGACACGTCC ATGGAGCGGG TGCACGACTG GGCCATCCCG CGGAAGCTCC ACCTGCTCGA GGCGATGCGG CGGGCGGCGG AGATCCCGGA CCTCCCGCGC GGCGCCGCGG AGAAGATCGG CGCGTTCGTC GCGCTGGTGG ACCGCTTCCA GGCCCGCTTC CGCGAGGGGC CGGTGTCGGA GGCCGCGCGC GCGCTGGTGG CGGAGGTGGA CCTGTTCAGC CACGTGCGCG CCGGGGTGCA GTCGCTCGAG GCGGGATCCC GCCGGGTGGA CGCGCTGGAG GGGCTGCTGC GCTCGCTCGA CGGCTACGTC CAGCGCACCG CGCGCCCGTC GCTCGCCACC TGGCTGCAGC GGCTCGCGCT CGACTCGCGC GAGGAGGAGG ATCCGTCGGG CGAGGGCGGG ATCACGCTCA TGACGCTGCA CGCGGCGAAG GGGCTCGAGT TCCCGGTGGT GTTCCTGGTG GGCGTCGAGG AGGACTACCT CCCCTGCGCC GGGATCCAGG GCGAGGCCCG CGACCTCGAC GAGGAGCGGC GGCTCGCCTA CGTGGGCATC ACCCGCGCGC GCGAGCGGCT GTACCTGACG CGCGTCGCGG CGCGATCGAA GCGCGGCAAG CTCCTGCCCC GCACCCCGTC GCGCTTCCTC GACGACCTGC CGCCCGCGGC CCACGAGAAG GTGGACCCGG CCGCGCTCGC CGCGCCGCCG CAGGACGTGG CGGCGCACAC CGAGAGCGTC ATGGCCGCGC TGCGCGCGCG GCTGGGCGGC CGCTGA
|
Protein sequence | MLDLSTLNPP QREAVMTTEG PLLVLAGAGS GKTRVIAHRV AYLLVQGVDP EQVLAVTFTN KAAGEMRERV AALAGPPGVD VFVSTFHSFG LWLLQQEHEA AGLPRRFAIC DAGDQLALVK RCMREVSVDD RKFDAHRVLS LLSRAKNAGK KRIVPREAGQ GDDYDLVAAE VYPRYEKALR AMRSVDFDDL IARPVAMLAH DPALRARCQE RFRYLLVDEY QDTNAAQLEL LKLLAGERRN VCAVGDDDQA IYGWRGAEVK NILRFERHFP GAKEVRLEQN YRSTGHILAC ANAVIAKNAA RKAKALFTAG EAGEPVRVVA MSEEEDEARF VAEEIARQRG EGRPWSHFAV LFRLNALSRP FEEAFREGSM PYKVHGGPAF FDRSEVRDLL AYLKLCVQPE DDVSLSRVVN VPPRGIGDTS MERVHDWAIP RKLHLLEAMR RAAEIPDLPR GAAEKIGAFV ALVDRFQARF REGPVSEAAR ALVAEVDLFS HVRAGVQSLE AGSRRVDALE GLLRSLDGYV QRTARPSLAT WLQRLALDSR EEEDPSGEGG ITLMTLHAAK GLEFPVVFLV GVEEDYLPCA GIQGEARDLD EERRLAYVGI TRARERLYLT RVAARSKRGK LLPRTPSRFL DDLPPAAHEK VDPAALAAPP QDVAAHTESV MAALRARLGG R
|
| |