Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3507 |
Symbol | rph |
ID | 7298089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 3921947 |
End bp | 3922666 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643596320 |
Product | ribonuclease PH |
Protein accession | YP_002493903 |
Protein GI | 220918599 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAAAGA ACGGCCGCGG CGAGCTCGAC CTCCGCCCCA TCCTCCTCGA GCCCCGCGTC TCCAAGCACG CGGAGGGCTC CTGCCTGGTT CGCTTCGGCG ACACCCACGT GCTGTGCACC GCCTCGGTGG ACGAGAAGGT CCCGCCGCAC GTGTACGGCA CCGGCGCGGG CTGGGTCACC GCCGAGTACG GCATGCTGCC GCGCTCCACG CACGAGCGCA TGCAGCGCGA GGCGGCCCGC GGGAAGCAGA CCGGGCGCAC CCTCGAGATC CAGCGGCTGG TCGGGCGGGC GCTGCGCGCC GCGGTGGATC TGCGCGCCAT CGGGCCGCGC ACCGTGACGC TCGACTGCGA CGTGATCCAG GCCGACGGCG GCACCCGCAC CGCCGCCATC ACCGGCGCCT ACGTGGCGCT CGTCCAGGCG GTGCGCGGGA TCCAGAAGCG CCGGCAGCTC GCGCAGGACC CGGTGAAGCG CAGCGTGGCG GCGGTGTCGG TGGGGATCGT CGCGGGGCAG GTGCACCTCG ACCTCGACTA CGACGAGGAC TCCACCGCCG AGGTGGACAT GAACGTGGTC GCGACCGGCG ACGGCGCGCT GGTCGAGGTC CAGGGCACCG CCGAGGGCAA GCCGTTCCCG CGCGCCGAGC TGGATCGGAT GCTCGACGCC GCGCTGGCCG GCCTGTCGCG CCTGAAGGAG CTCCAGGAGG CGGCGCTTCG CACGCCGTGA
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Protein sequence | MRKNGRGELD LRPILLEPRV SKHAEGSCLV RFGDTHVLCT ASVDEKVPPH VYGTGAGWVT AEYGMLPRST HERMQREAAR GKQTGRTLEI QRLVGRALRA AVDLRAIGPR TVTLDCDVIQ ADGGTRTAAI TGAYVALVQA VRGIQKRRQL AQDPVKRSVA AVSVGIVAGQ VHLDLDYDED STAEVDMNVV ATGDGALVEV QGTAEGKPFP RAELDRMLDA ALAGLSRLKE LQEAALRTP
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