Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3487 |
Symbol | |
ID | 7296748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 3896469 |
End bp | 3898214 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 80% |
IMG OID | 643596294 |
Product | histidine kinase |
Protein accession | YP_002493883 |
Protein GI | 220918579 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0451928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCTCC GCGGGAAGCT CGCGCTCGCG TTCTCGCTGT TCGCGGCGGT GCCGCTCGCC GCCACGCTCG TGCCCGTGTC GCGGGCGCTC GGGCGCGCGC TCACCACCGA GCACGCCGCC CGCCTGGACG GCGCCGCGGC CGCCGTGCAG AAGGAGCTGG CGCGCCTCGG CGAGCACGCG GCCGGGGCGG TGGCCGACCT GGCGCGGGCG CCGGAGCTGG AGGCGTTCGC GCGGGACCGG TCGGCGGACG GCGCCGAGCT CGCGGAGGCG GCGGCGCGCG CCGGCGAGTG GATGGGGCCG CGCGGCCTGG ACGTGCTCGC GGTGCTGGAG CCGGACGGGC GGGTGGTCTC GTCGGGTCAC CTGCCCGGCC GCGCCGGCGA TCCCGACCCG GAGCTGGGCG ACCTCCCCGA CGCGGTGCGC CCCGGGCGCG CGGTGCCCCG GGTCGTCTCG CGGGCCGGGC CGGAGGGCGT GGAGCCGGTG CTGGCGCTGG TGGCCTGGGC GCCGGGGCCG GGCGATCCGC CGCTGCGGGT CGCCGGCGGC GTGGCGCTCA CCGAGGCCCG CGCGGCCCGC CTGGCCGCGC TGACCGGCGG CGCGGTGGTG ATCCGCTCGG CGGACGGCGA GGTGGTGGCG GCCGCGTCGG CGGAGGCGCC CGGGCCGGCG CGCGGCTGGC GGCGGCTGCG CCTGCTGTTC GGCGGGCTCT CCGCCGCGCC CCGCCGCACG ATCCCGCTCG GCCCGTCCGA AGCCCCGGTC GCGCGGGTCG AGGTGTCGCT CGCGTCCGAG GGGCTGGCCC GCGCCGAGAC CACGGTCCTG CTCGCGTTCC TGGGCGCGCT CGCGGCGGGC GTGGCGGCCG CGGCCGCGCT GGGCGCGGTG GTGGCGGCGC GCATCACCCG GCCGCTGGAG GGGCTGCGGG CCGCGGCCGC GCGGGTCGCC GGCGGGGACC TGGCCGCGCG GGTCGAGGTC CGCGCCGGTG GCGAGGTGGG CGAGCTGGTC CGGGCGTTCA ACGCCATGAC GCAGGACCTG GCGCAGGGGC GCGCCCGGCT GGCGCAGGCG GAGCGCATCG CCGCCTGGCG CGAGGTGGCC CGCCGGCTGG CGCACGAGAT CAAGAACCCG CTCACGCCCA TCGCGATGAG CGTGGAGACG CTCCGCGAGG CGCACGCGCA GGGGCGCGCC GACTTCCCCG AGATCTTCGA CGAGGGCACG CAGGCGATCG GCGAGGAGGT CCGGCGCCTG AAGCGGATCG TGGACGAGTT CAGCCGCTTC GCCCGCCTGC CCGCGCCGGA GCGCAGCGAG GTGCCGGCGG AGGAGCTGGC GTCCGCGGTG CTGGCGCTGT TCCCGGCGGC GCCGGCGGGC GTCGAGGTCG AGCGGGCCAT CGCGCCCGAC CTCCCGGCGG TGCTGGCCGA CCGCGACCAG GTCATGCAGG TGCTGCTCAA CCTGGTCCGG AACGCGCTCG ACGCCATGCC GTCCGGAGGC CGGCTGCGCC TGGTGGCGCG CAGCGACGGG GATGCGGTGG CGTTCGAGGT GTCCGACTCC GGCGCGGGGA TCGCGCCGGC CGACCTGGAG CGGGTGTTCG AGCCCTACTT CACCACCAAG CCCGGCGGCA CGGGGCTCGG GCTCGCCATC GCGCGCCGCA TCGCCGAGGA GCACGGCGGC TCGCTCGAGG CGGCGTCCCC GCCCGGCGCA GGCGCGACGT TCACGCTGAG GCTGCCGGTC GCCGCGGCGG CGGTGCGGCA AGCGCCGGGC GCGTGA
|
Protein sequence | MTLRGKLALA FSLFAAVPLA ATLVPVSRAL GRALTTEHAA RLDGAAAAVQ KELARLGEHA AGAVADLARA PELEAFARDR SADGAELAEA AARAGEWMGP RGLDVLAVLE PDGRVVSSGH LPGRAGDPDP ELGDLPDAVR PGRAVPRVVS RAGPEGVEPV LALVAWAPGP GDPPLRVAGG VALTEARAAR LAALTGGAVV IRSADGEVVA AASAEAPGPA RGWRRLRLLF GGLSAAPRRT IPLGPSEAPV ARVEVSLASE GLARAETTVL LAFLGALAAG VAAAAALGAV VAARITRPLE GLRAAAARVA GGDLAARVEV RAGGEVGELV RAFNAMTQDL AQGRARLAQA ERIAAWREVA RRLAHEIKNP LTPIAMSVET LREAHAQGRA DFPEIFDEGT QAIGEEVRRL KRIVDEFSRF ARLPAPERSE VPAEELASAV LALFPAAPAG VEVERAIAPD LPAVLADRDQ VMQVLLNLVR NALDAMPSGG RLRLVARSDG DAVAFEVSDS GAGIAPADLE RVFEPYFTTK PGGTGLGLAI ARRIAEEHGG SLEAASPPGA GATFTLRLPV AAAAVRQAPG A
|
| |