| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3484 |
|---|
| Symbol | |
|---|
| ID | 7296745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 3890784 |
|---|
| End bp | 3893612 |
|---|
| Gene Length | 2829 bp |
|---|
| Protein Length | 942 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643596291 |
|---|
| Product | penicillin-binding protein, 1A family |
|---|
| Protein accession | YP_002493880 |
|---|
| Protein GI | 220918576 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
|---|
| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0146326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTTC ACCGCCGCGG CGCTTTGCCG GACGCCACCC CGGGAGCTAT CGTTCGAGCC
CTCGCCGTGG ACACCCCCTC CCACCCCGCC ACACCGCCCC CGGCCGCCGT CCGCGCCGCC
GAGGGCGAGG AGCCGCCGCG CGTGCGCCGT CGCCTCTCCC GCAAGTCGAA GCGGCTCCTC
CGCGCCGCCG CCCTGGCCGT GCTCGCCGGC GGCCTGCTCG GCGGCGGCCT GCTCCTCGCC
TGGACCCGGG AGCTGCCCGC GTTCGACGGC CTGAAGGACT ACGAGCCGCT CGTCTCCACC
CGCGTGTTCG GCGCCGACGG CGAGGAGGTG TTCCAGTTCG CGCGCGAGCG CCGCACCGTG
GTGCCGATCG ACGGCATCCC CGACGTGCTG AAGAAGGCGG TGCTCGCCGC GGAGGACGCG
CGCTTCTACG AGCACGAGGG CGTGAACTAC CTCGCCATCG CGCGCTGCGC GGCGAAGGGG
CTGCTGGGCG GCGGCGTGAA GTGCGGCGGC TCGACCATCA CGCAGCAGGT GGTGAAGACG
TTCCTGCTCC CCACCGAGTG GCGCGTGAAG CGGAAGGTGA AGGAGCTCGT GCTGGCGCCG
CGGCTCGAGC AGAACCTGAC CAAGGACGAG ATCCTCTACC TCTACCTGAA CCAGATCTAC
TTCGGCCACC GGCGCTACGG CGTCGAGGAG GCGAGCCGCT TCTACTTCGG CAAGGGCGTG
AAGGACCTCA CGCTCGGCGA GGCCGCCGTG CTCGCCGGCG TGATCCAGTC GCCCATGCGC
TGGTCGCCGG TGAACCACCC CGCGCGCGCC AAGGAGCGGC AGCGGTACGT GCTGCGCCGG
ATGATGGAGG AGGGCTTCAT CACGCGCGCG CAGGCGGAGG CCGAGTCGGC GCGTGCCATC
CGCACGCGCC CGCCGCCGGA CGATCCGCCG GGCGCGTGGT ACGCGGACGC GGTCCGGAAG
TACCTGGACG AGCGCTACGG CGCCGAGGCG GTCGAGACGC AGGGGCTGCA GGTGGACGTG
GCCATGGACG CGCGGCTCCA GGCGGCCGCC GAGACCGCGC TCGAGGGCGC GCTGCGCGCC
GTGGACAAGC GCCAGGGCTG GCGCGGCCCG CTGCTCCACC TCGACCCGCC GCGCGCCGCC
GCGGCGCTCC CGCTCTGGCG CAAGCGGCTC GAGGCGATCG AGCCCGGCCC GGGCGAGGTG
TACGTGTGGG ACCTCGGGCG CGTGAACCCC GACCAGATCG AGCCGGGGGA GGACGAGGAG
CAGGAGCGCG ACGTGGCGCG CATGGCGCGC GCGCGGCGGC TCGAGGACGG CGGCATCTAC
GCCGGGCTGG TGCGGGAGGT GGACGACCGG ACCGCGGTGG TGGACCTGGG CAACGCGCGC
GGCGAGGTGA CGCTGGCGCA GGCCGCCTGG GCCCGCAAGT GGAACCCGAC CTCCGCCACC
GCCGCCCCGA AGAAGCTGTC CACGGTGGTG CAGCCGGGCG ACGTGGTGAA CGTGCGCGTG
GTGCCGGGGA AGGTGCCGGC CGCGCGCACC GCGGCCGCCG GCAAGCCCGT GCCGCTCGCG
CTGGAGCAGA CGCCGCTGGT GCAGGGCGCG CTGGTGGCCA TCGACCCGGC CACGCGCGGC
GTGCGCGCGC TGGTGGGCGG GCTCGACTTC CAGGCCTCGC AGTTCAACCG CGCCACGCAG
GCGCGCCGGC AGCCGGGCAG CGCCATGAAG CCGTTCGTGT GGGGCGCCGC CATCGAGTCG
CGCCGCTTCA CGCCGGCCAC GGTGGTCTAC GACACGCCCG ACCTGTACCG CGACCCGTGG
ACCGGCAAGG AGTGGAAGCC GCGCAACTTC GAGAAGGACC AGTTCGACGG CCCCATGCTG
CTGGCCTCGG CGCTGGCCCA CTCCAAGAAC ACCGTCTCGG TGAAGCTGGT GGACGCGCTC
GGGGTGGATG CGGTCATCGG CTTCTCGAAG CGGATGGGGA TCGCGTCGGA GCTGCCGCGC
AACCTCACGC TCGCGCTCGG GACGGGCGAG GTGCTGCCCA TCGAGCTGGT GAACGCGTAC
GCGAGCCTCG CGGCGAACGG CTTCCAGACG CCGCCGCTGG TGGTGCTGCG CGTGCGCGAC
CGCACCGGCA AGGTGCTGGA GGAGCAGCGG CCGGTCGCGC CGCCCGCGCC GTCCCGCGAC
GGCGCGGTGG TGGTGACGGC CTCCGCGGTC GAGGCGGCCG GCGCCCCCGC GGCGCCCGCT
GCCGCGCCCA CCGCCGCCGT CCCCGGCGCT GCTCCGGCCC CGGCCGACGC GCCCGCCGGG
GCGCTCGCCG CCGCGGCCCC GGCGGTCGAG GGCGCGGGCG CCACCGCCGC GCCGGCGCCG
TTCCCGGTCC CGACCTCCGG CACTCGGCCC GACGTCTCGT ACGTCGTGAC CTCGATGCTG
CGCGGCGTGA TCGAGGGCGG GACCGGCGCC GCCGCGCGCG TGCTGGGACG GCCCGCCGCC
GGCAAGACCG GCACCGCCCA GGATCACCGC GACGCCTGGT TCGTCGGCTA CACGCCGGAG
CTGGTCGCGG GCGTCTGGGT CGGCTTCGAC GACCACTCGC CGCTCGGGCC GCGCGAGACC
GGCGCGGTGG CGGCGCTCCC GGCCTGGATC GCGTTCATGC AGGCGTCGCT GGGCGGCAGG
CCCGCGAGCG ACTTCGACCC GGTGCCCGGC GTCGAGGTGG CGCGGGTCGA TCCGCAGAGC
GGCCTGCTGG CCGCGCCCGA CCAGGGCGGC GCGCCCGCGC TGCCGTTCCT GTCCGGCACC
GCGCCGGCGC AGGAGGCCTC GTCGCACCCG GGCTCCGCGC CGCAGAACTT CTTCATGGAC
GACCATTGA
|
|---|
| Protein sequence | MTFHRRGALP DATPGAIVRA LAVDTPSHPA TPPPAAVRAA EGEEPPRVRR RLSRKSKRLL
RAAALAVLAG GLLGGGLLLA WTRELPAFDG LKDYEPLVST RVFGADGEEV FQFARERRTV
VPIDGIPDVL KKAVLAAEDA RFYEHEGVNY LAIARCAAKG LLGGGVKCGG STITQQVVKT
FLLPTEWRVK RKVKELVLAP RLEQNLTKDE ILYLYLNQIY FGHRRYGVEE ASRFYFGKGV
KDLTLGEAAV LAGVIQSPMR WSPVNHPARA KERQRYVLRR MMEEGFITRA QAEAESARAI
RTRPPPDDPP GAWYADAVRK YLDERYGAEA VETQGLQVDV AMDARLQAAA ETALEGALRA
VDKRQGWRGP LLHLDPPRAA AALPLWRKRL EAIEPGPGEV YVWDLGRVNP DQIEPGEDEE
QERDVARMAR ARRLEDGGIY AGLVREVDDR TAVVDLGNAR GEVTLAQAAW ARKWNPTSAT
AAPKKLSTVV QPGDVVNVRV VPGKVPAART AAAGKPVPLA LEQTPLVQGA LVAIDPATRG
VRALVGGLDF QASQFNRATQ ARRQPGSAMK PFVWGAAIES RRFTPATVVY DTPDLYRDPW
TGKEWKPRNF EKDQFDGPML LASALAHSKN TVSVKLVDAL GVDAVIGFSK RMGIASELPR
NLTLALGTGE VLPIELVNAY ASLAANGFQT PPLVVLRVRD RTGKVLEEQR PVAPPAPSRD
GAVVVTASAV EAAGAPAAPA AAPTAAVPGA APAPADAPAG ALAAAAPAVE GAGATAAPAP
FPVPTSGTRP DVSYVVTSML RGVIEGGTGA AARVLGRPAA GKTGTAQDHR DAWFVGYTPE
LVAGVWVGFD DHSPLGPRET GAVAALPAWI AFMQASLGGR PASDFDPVPG VEVARVDPQS
GLLAAPDQGG APALPFLSGT APAQEASSHP GSAPQNFFMD DH
|
|---|
| |