| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3465 |
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| Symbol | |
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| ID | 7296726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | - |
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| Start bp | 3869465 |
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| End bp | 3870820 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 643596272 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002493861 |
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| Protein GI | 220918557 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0563364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAACG CGCGCACCGC CTCCTTGCTG CTCCTGCTCG CCGCCGCCGG CTGCGCCGGC
TCGCGCGCGA ACGCCCCGGC GCCGGCGTCC GGCGCCCGCC CCGCGGGGCT CCCCGCCGAC
GCGGCCGAGG CGCTCTCGGC GCGCGCGCAG CGGCTCTACG CCGAGGCCGT CCAGGCTCAG
GAGGACCAGC GCCGGCTCAA GGTGCCCACC GACTGGGCGG TCCTCGAGCG CAAGTGGCGC
GCGGTGCTCG ACGCGGGCGA GGTCGCCGAG GCGCGGCACA ACCTGGGCGT CGCGCTCGAG
GCGCAGGGGC GCGTGGACGA GGCGCGGGCG GAGTACCAGA AGGCCCTCGC GGCGAAGCCC
GGCCTGCGCC AGTCGGCGGT GAACCTGGGC GTGCTGCTCG AGAAGCAGGG CGACCTGGCC
GGCGCGCAGT CGATCTACGC GGCGGTGGTG CGCGACTTCC CCGAGGACGC CCGCGCGCGC
GAGCGGCTCG CCGCGATGTA CCGCAACGCC GGCCAGCTCG ACGAGGCCTG GCGGCTGGCC
CGCGAGGCCC TGCTGCGCGA CTCGCGCTCG GTGGGCGCGT ACGTGGTGAT GGCGCGGGTC
TCGCTGCAGC GCGGCAACCT GGACGTCGCG CAGCTCATCC TGCTGCGCGC GCAGAAGCTC
GCGCCCTCCG AGCCGGAGCT GCCCTTCCTC GCCGGCGAAG TGCTCGCGAA GCAGGGCGAC
GTCGAGGCGG CGGCCGCGCA GTGGCGCAAG GCGCTCACCC TGGACGACGG GTACCTGCCG
GCGCGCCGCG CGCTGCTCGA CGCCGCCGTG AAGGGCCGCC GCTGGCCGGT GGTCGCGGAG
CACGCGCAGG CCATGGTGCA CGCGGATCCC AAGAACGCGC CGGCGTGGCT GGCGCTGGGC
GTCGCGAAGC GCCACCAGGA CAAGCCCGAC GAGGCGCTCG CCGCGTACGC GAAGGCGCAG
GAGGCGTCCG GCGACGCGCT GCCGGAGGTG CACCTCGCCC GCGGCGTCCT GTTCATGCGC
GTGAAGAACG AGTGCGAGCC GGCGCTCGAG GAGCTCCGCG CCTACGGCCG GATGGTGGGG
CCGGTGGCGT CCGCCGACTC GCCGGCGCTC AAGCTCCAGC GGGAGTGCGA GCAGATCGTG
GCCGAGAACA AGCGGGCGCA GGAGGCCGCG AAGGAGATGC AGCGGGACGC GGAGCGCAAG
GCGGCGGAGG CCGCCGCGCG CAAGGCCGCG GCGGCCGCGC CCGCCGTCGC GCCTGCCGCC
GCCGGGGCAG GGGCGGGGAA GAGCGAGCCG GGGGAGCCGG GTACCGGTGC GGGCGGAGGT
GCCGCGCCCA CATCGCCCCC GAACCCGTCA CGGTGA
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| Protein sequence | MTNARTASLL LLLAAAGCAG SRANAPAPAS GARPAGLPAD AAEALSARAQ RLYAEAVQAQ
EDQRRLKVPT DWAVLERKWR AVLDAGEVAE ARHNLGVALE AQGRVDEARA EYQKALAAKP
GLRQSAVNLG VLLEKQGDLA GAQSIYAAVV RDFPEDARAR ERLAAMYRNA GQLDEAWRLA
REALLRDSRS VGAYVVMARV SLQRGNLDVA QLILLRAQKL APSEPELPFL AGEVLAKQGD
VEAAAAQWRK ALTLDDGYLP ARRALLDAAV KGRRWPVVAE HAQAMVHADP KNAPAWLALG
VAKRHQDKPD EALAAYAKAQ EASGDALPEV HLARGVLFMR VKNECEPALE ELRAYGRMVG
PVASADSPAL KLQRECEQIV AENKRAQEAA KEMQRDAERK AAEAAARKAA AAAPAVAPAA
AGAGAGKSEP GEPGTGAGGG AAPTSPPNPS R
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