| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3463 |
|---|
| Symbol | |
|---|
| ID | 7297479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 3867033 |
|---|
| End bp | 3869075 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643596270 |
|---|
| Product | FHA domain containing protein |
|---|
| Protein accession | YP_002493859 |
|---|
| Protein GI | 220918555 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3456] Uncharacterized conserved protein, contains FHA domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0309728 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCC CCATCACCCT CAAGGTGTTC CGCGGCAACG AGCTCGTGCG CAGCGAGCAG
TTCAGCCGCG AGATCATCAA GATCGGACGC CTCGCGTCGG CGCACCTGGT GCTCGACGAC
GAGAAGGTCT CGCGCATCCA CTCGGTGATC GAGGTCTCGC CGGACGGCGC CATCTCCATC
ATCGACATGG GCAGCGCCGA GGGGACCTTC GTCAACGGCA AGAAGGTCAG CCGCGGCGCG
CTGCGCGCCG GCGACCAGAT CACGCTCGGC GGCCTCCTCA TCGTGGTGGA GGGCGCGGCG
GCGGAGGTGC CGGCGCCGGC GAACGCGGCG GTGCCCGCGG CCGAGACGGT GAACCACGCG
GTCGCCGCGC CCGCGGCGGC CCGCCCGGCC AAGGTGAACG GCAACGGCGT GAACGGCCAC
GGGCACGCGC ACGCCGAGCT GCCCGCGCCC GCACCCGCCG CAGCGGTCGG CGCCGCCGAG
GCGGCGCCGG TCGCGGCCGC CCCGGTCGTC GCCGCGGCCG CTGCCGTCGC CGCGGCCCCC
GCGCCGTCGC CGCGGCCGGA GCCCGCGCCC GCCGCGGCCC CGGCGCCCGC GCCGCGCCGG
TCCACCGAGC CGCGCCGCCG CGCCGCGCTC CGTCCCGCCG ATGCCGCCGC CGCCGAGGAT
CTCTCGGCGG TCGCCGACCT CGGGGTCGAG CTGCGCGTGC TCTGGGGCGA CACGCTGCTC
GACGCCGCCA CGTTCGTGCG GCCGAAGCAG CCGGTGCTGG TGGGCGACGG CGAGAAGTGC
AGCCTGCGCG TGGAGGGGCT GCCGCTCGCC GAGTTCCCGA TGCTCCGCTT CGAGGACGGC
GACTACAAGT TCGCGTTCGG CTCCGGGATG ACCGGCGTGG TGGACGAGCG GGGGCAGCGC
ACGGCGTTCG GCGAGCTGGT GAAGTCGCGC AAGGCCGCCA GCGACGAGAA GGTGAAGGGC
GCCTACTGGA TCCCGGTGCC CCGCGCCGGC GCGGTCCGCG CCGAGGTGGG CAGCCGCCTC
GCCATCGAGG CGCGCCCGAA GAAGCCGGAG CCGGTGAAGC CCGTCCCGCT CTGGGACCGC
GTCAACTACC GGCTGCTCAA CCTGTTCCTG GTGCTGTTCT TCATCCAGTC CGGGTTCATC
GTCGCGGCGA ACAACTTCCC GTACGACACC GACGTCCTGG CCGACGACCT GTTCAAGAAC
CCGTCCCGGA TGGCGAAGTT CATCATCAAG CCCCCCGAGG CGAAGCCGAA GAAGCTCGAG
AAGCTCGCCG GCGGCACGCA GAAGGACGAT CCGGGCGAGA TGGCCGAGAA GCACAAGGGC
GACGAGGGCA AGATGGGCAA GCGGGACGCG CCCAAGTCGA ACGCCCGGTC CGCGCCGCGC
GCCATCGACC CGAACGCCAA GGACGTCGTG AAGAGCACCG GCCTGCTCGG CGCGCTCGGC
CGCGGCGGCG GCGGGCTCTC CACCGTGTTC GGCTCGGGCG GCCTGGGCGG CGACCTGAAG
GGCGCGGTCG GCAACATGTT CGGTCCGGTG GTCGGCGACG CGCAGGGCCT GGGCGGCCTG
GGCATCCGCG GCTCCGGCTC GGGCGGCGGC GGCTCCGGCG AGACCATCGG CATCGGCGCC
GTCGGCACGA AGGGCCGCGG CGGCGGGCTC GGCACCTACG GCACCGGCGT GGGCGGCCTC
GGCAAGAAGG GCGACCGCGA CATCAGCATC GGCACCGGCG CCGCCCAGGT CATGGGATCG
ATCGACAAGG AGTTGGTCCG CAAGGTCATC CAGGACCACG CCGCGCAGAT CCGCTACTGC
TACGAGCAGC AGCTCGCCAT CAACCCGCGG CTCGCGGGCA AGGTGTCGAT CAAGTGGGTC
ATCCAGACCG ACGGCAGCGC CACCAGCCCG CAGGTGGACT CCGGGGCGAC CACGCTCGAG
GACGCCAAGG TCCACGACTG CATGATGAGC CGCATCACCA GCTGGCAGTT CCCCAAGCCC
AAGGGCGGCG GCATCGCCGT CATCACCTAC CCCTGGATCC TCCGGTCCGC CGGCGGCGAA
TAG
|
|---|
| Protein sequence | MATPITLKVF RGNELVRSEQ FSREIIKIGR LASAHLVLDD EKVSRIHSVI EVSPDGAISI
IDMGSAEGTF VNGKKVSRGA LRAGDQITLG GLLIVVEGAA AEVPAPANAA VPAAETVNHA
VAAPAAARPA KVNGNGVNGH GHAHAELPAP APAAAVGAAE AAPVAAAPVV AAAAAVAAAP
APSPRPEPAP AAAPAPAPRR STEPRRRAAL RPADAAAAED LSAVADLGVE LRVLWGDTLL
DAATFVRPKQ PVLVGDGEKC SLRVEGLPLA EFPMLRFEDG DYKFAFGSGM TGVVDERGQR
TAFGELVKSR KAASDEKVKG AYWIPVPRAG AVRAEVGSRL AIEARPKKPE PVKPVPLWDR
VNYRLLNLFL VLFFIQSGFI VAANNFPYDT DVLADDLFKN PSRMAKFIIK PPEAKPKKLE
KLAGGTQKDD PGEMAEKHKG DEGKMGKRDA PKSNARSAPR AIDPNAKDVV KSTGLLGALG
RGGGGLSTVF GSGGLGGDLK GAVGNMFGPV VGDAQGLGGL GIRGSGSGGG GSGETIGIGA
VGTKGRGGGL GTYGTGVGGL GKKGDRDISI GTGAAQVMGS IDKELVRKVI QDHAAQIRYC
YEQQLAINPR LAGKVSIKWV IQTDGSATSP QVDSGATTLE DAKVHDCMMS RITSWQFPKP
KGGGIAVITY PWILRSAGGE
|
|---|
| |