| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3407 |
|---|
| Symbol | |
|---|
| ID | 7297422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 3795877 |
|---|
| End bp | 3797631 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643596214 |
|---|
| Product | peptidase M61 domain protein |
|---|
| Protein accession | YP_002493804 |
|---|
| Protein GI | 220918500 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTACC GCCTCTCGAT GCCCGAGCCC CACGGCCACC TGTTCCACGT CGAGGTGCAC
GTCGAGCGCC CCGGTCCGTC CGCCGAGCTG CGCTTTCCGG TCTGGACGCC CGGCAGCTAC
CTGGTCCGCG AGTACGCGCG GCACGTGGAG GGGCTCGCCG CCGAGGACGG CAGCGGGCGA
GCGCTCGCCC TGGAGCGGCT CGACAAGCAC CGGGTCCGGG TCGCCTGCGG CAACGCGACG
CAGCTCGTGC TCCGCTACCG CGTCTACGCG AACGACCTGA CCGTCCGCAC CTGCCACCTC
GACGGCACGC ACGGTTACCT GAACGGCGCC GCGGTGTTCC CGTGGGTCCC CGGGCGAGAG
CGGGAGCCGC ACCTGCTCGA GATCGCCCCG CCCGCCGGCT GGTCGGTCGC GACCGCGCTC
GAGGGCGGCC CGACGACGTT CACGGCGCGC GACTACGACG AGCTGGCCGA CTCGCCGGTG
GAGATCGGCA CGCACCGGCT GGTCCGGTTC GAGGCGCTCG GGAAGCCCCA CCAGATCGCG
CTGTGGGGGC GCGGGCACGT GGACGGGGAG CGGCTCGCCG AGGACGCGCG CCGCATCGTG
GAGGCGCAGG GGAAGCTGAT GGGCGGGGAG CTGCCCTACG ATCGCTACCT CTTCATCGTG
CACGTCACCG ACAAGCGGCG CGGCGGGCTC GAGCACGCGC GCTCGACGAC GCTCAACGTG
GCGCGCGGCG GCTTCTTCCC GCGCGACGCG TACGTGGAGA CGCTCGGGCT GTTCTCGCAC
GAGTACTTCC ACCTGTGGAA CGTGAAGCGG CTCCGCCCCG CGGCGTTCGT GCCGTTCGAC
TACGGGCGGG AGCAGTACAC GCGGCTCCTG TGGTGGTTCG AGGGTGCGAC CAGCTACTAC
GAGCAGCTCG CGCTGGTGCG CGCCGGGATC CTGTCGCCGA AGAAGTGGCT CGAGAACCTC
GGCCAGGCGC TCACCAGCCT CGAGCGCACG CCCGGCGCAG GGAAGATGAG CGTCGAGGAG
GCGAGCTTCC TCGCCTGGGT GAAGCACTAC CGGCCCGACG AGAACTCGCC CAACAGCGCC
ATCTCCTACT ACCTGAAGGG CGAGCTGGTG GCGCTCGCGC TCGACCTCGC GCTGCGCCGC
GCCGGCCACT CGCTCGACGC GCTCCTGCGG ACGCTGTACG CGCGCTTCGC CGACGGAGGC
GTGCCCGAGG ACGGCGTGGA GCGGGTCGCC GCCGAGCTGC TCGGCGAGGC GCCCGCGCGC
GCGTTCTTCG ACCGGTGGGT GCGCGGGACC GCGCCGCTCC AGCCCGACCT CGACCTCGTC
GGCCTCGCGC TCCGCCGGCG CGCCGCGAGC GGCTTCGAGG ACAAGGGCGG CAAGCCCGCC
AGCAACGGCA ACCACGATGA TCGGCCGCCC GCCGGCTGGC TCGGCGCCGA CCTCGCGACG
TCGCCCAAGC TCGCGGTGCG GAGCGTGCGC GAGGGCAGCC CCGCCTGGCG GGCCGGGCTC
TACGCAGAGG ACGAGGTCGT CGCCGAGGAC GGGTTCCGGG TGGACGCCGG CGCGCTGTGG
AACCGGCTCT GCGAGGTGGG GGAGGGCGGT GCGCTCCGGC TGACCGTGTT CCGCCGCGAC
GAGCTGGTCG AGGTGCTTGT GACGCTCGGG AAGGCGCCCG AGGACACCCT CTGGCTCGAG
CCCGCCGCCG CGCCGTCGCC CGAGCAGAAG GCCGCGTTCG AGGCCTGGGC CGGCGCGCCC
TTCCCGGCGA AGTGA
|
|---|
| Protein sequence | MRYRLSMPEP HGHLFHVEVH VERPGPSAEL RFPVWTPGSY LVREYARHVE GLAAEDGSGR
ALALERLDKH RVRVACGNAT QLVLRYRVYA NDLTVRTCHL DGTHGYLNGA AVFPWVPGRE
REPHLLEIAP PAGWSVATAL EGGPTTFTAR DYDELADSPV EIGTHRLVRF EALGKPHQIA
LWGRGHVDGE RLAEDARRIV EAQGKLMGGE LPYDRYLFIV HVTDKRRGGL EHARSTTLNV
ARGGFFPRDA YVETLGLFSH EYFHLWNVKR LRPAAFVPFD YGREQYTRLL WWFEGATSYY
EQLALVRAGI LSPKKWLENL GQALTSLERT PGAGKMSVEE ASFLAWVKHY RPDENSPNSA
ISYYLKGELV ALALDLALRR AGHSLDALLR TLYARFADGG VPEDGVERVA AELLGEAPAR
AFFDRWVRGT APLQPDLDLV GLALRRRAAS GFEDKGGKPA SNGNHDDRPP AGWLGADLAT
SPKLAVRSVR EGSPAWRAGL YAEDEVVAED GFRVDAGALW NRLCEVGEGG ALRLTVFRRD
ELVEVLVTLG KAPEDTLWLE PAAAPSPEQK AAFEAWAGAP FPAK
|
|---|
| |