Gene A2cp1_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_3324 
Symbol 
ID7300216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp3701588 
End bp3702496 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content75% 
IMG OID643596133 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002493724 
Protein GI220918420 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.749383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACCA CCTCCGCCAC CACGCCTGGA CACCCCGCGG AGCGGAGCTC GGCGTTCGAG 
CGCCTCCGCC CCCGCCTGTT CGGCATCGCC TACCGCATGC TCGGCACCGT CCCGGACGCG
GAGGACGTGC TGCAGACCGC CTACCTGCGC TGGCACGAGG CGGACGTCGC GGCGGTGCAG
AACCCGGAGG CCTGGCTGGT GGCGGTCACG AGCCGGCTCG CGGTCGATCG GCTGCGCCAG
GCGAGCGGCG AGCGCCAGCG CTACGTCGGC GACTGGTTGC CCGAGCCGCT CGTCACCGGC
GCCGCGCCTC CCGCCGACGC GCGCTCCGAG CTGGCCTCCG ACCTGTCCAT GGCGTTCCTG
GTGCTGCTCG AGCGGCTCTC GCCGGACGAG CGCGCCGCGC TGCTGCTCCG CGACGTGTTC
GGCGCCGGCT ACGCGGAGAT CGCCAGGGTG CTGGACCGGA GCGAGGAGGC CTGCCGCCAG
GTGGTGCACC GGGCGCGGCT GCGGGTGCGC GAGGGGCGGC CGCGGTTCGA GGTGCCGCTC
GAGGCCAAGC ACCGGCTGGT GGCTCGCTTC CTGGACCGGC TGGCCGCGGC CGACGAGCAG
GCACTGCTCG CGCTCGTGTC CGACGACGCC ACCTGGACCT CCGACGGCGG CGGCAAGGTC
CACGTCGCTC GCGGGCTCCG CGGCAGCGCG CGCATCGTCC GGTTCATGCT GAACGTGGCC
CGCAAGGGCG CCGGCCGGAC GCGGCGCGAG CTGGTGTGGG TCAACGGCGA GCCCGCCATC
CTCACCACCC TCGACGGCCG GCCGTTCTCG ACCATCTCGT TCGCCACCGA CGGCGAGCGC
GTGACCGCGT TCTACGCGGT GCTCAACCCG GACAAGTTGC GGCGGGTCGA GCCCGCTCGG
GCGCGCTGA
 
Protein sequence
MMTTSATTPG HPAERSSAFE RLRPRLFGIA YRMLGTVPDA EDVLQTAYLR WHEADVAAVQ 
NPEAWLVAVT SRLAVDRLRQ ASGERQRYVG DWLPEPLVTG AAPPADARSE LASDLSMAFL
VLLERLSPDE RAALLLRDVF GAGYAEIARV LDRSEEACRQ VVHRARLRVR EGRPRFEVPL
EAKHRLVARF LDRLAAADEQ ALLALVSDDA TWTSDGGGKV HVARGLRGSA RIVRFMLNVA
RKGAGRTRRE LVWVNGEPAI LTTLDGRPFS TISFATDGER VTAFYAVLNP DKLRRVEPAR
AR