| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3318 |
|---|
| Symbol | |
|---|
| ID | 7300210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 3696483 |
|---|
| End bp | 3697487 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643596127 |
|---|
| Product | RNA polymerase factor sigma-70 |
|---|
| Protein accession | YP_002493718 |
|---|
| Protein GI | 220918414 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGCCG CGCTGGCGCT TCGCACCGGC CTGGTCCTCC GCTATGACCT CGGTCGCATG
ACCACGGTCG ATCAGCTGGA GACGCACCGG GCGGCGCTCA CCGGTCACTG CTACCGGATG
CTGGGCTCCG CCGCCGAGGC GGACGACGCG GTCCAGGAGA CGCTGCTGCG CGCCTGGCGC
AGCCTCGAGC GCTTCGAGGG ACGCTCGTCG CTCCGCACCT GGCTGTACCG GATCGCCACC
CGGGTGTGCC TCGACGCGCT GGAGGACCGG GCGCGGCGGG CCCGCCCGGT GGATCTCGGG
CCGGCCGGCA CCGCGGCGGA CGCGCTCGAG GCGCTCCCTG GGGAGCGCTG GATCGAGCCC
ATCCCCGACG CGCAGGCGAT CCCGGCCGAC GTCGATCCCG CCGAGCAGGT GCTGCTGCGC
GAGAGCATCC GGCTCGCGTT CGTGGCCGCG CTCCAGCAGC TGCCGCCGCG CCAGCGGGCC
GCGCTGCTCC TGGCGGACGT GCTGGGCTGG TCGGCCGCGG AGATCGCCGG CGACCTCGAC
ACGTCCGTGG CGGCCGTGAA CAGCATGCTG CAGCGGGCCC GCGCGACGCT GCCGGCGCGG
GATCCCTCCG GCCCCGGCGC CGCGCTGTCG CAGGCCGAGG CCGTGCTGCT CGAGCGCTAC
GTGGACGCCT TCGAGCGCTA CGACGTGGCG GCGCTCACCG CGACGCTCCG CGAGGACGCC
TGCTTCTCCA TGCCGCCGTT CTCGCTCTGG CTGCGGGGGC GCGAGGCGGT GGCGGCCTGG
CTCACGGGCC CGGGCGCCGG CTGCCGCGGC TCGCGCCTGG TGCCCACCGC CGCGAGCGGC
CTGCCCGCGT TCGCGCAGTA CCGGCCCGCC GGCCCCGGCG TCCACCGCCC CTGGGCGCTC
CTCGTGCTGG AGCCGGCGCC CGGCGGGATC GCCGCCTGGA CCGCGTTCCT CGACACGGCC
ACCCTGTTCC CGCGCTTCGG CCTCCCGTCC GAGCTCACCT CGTAG
|
|---|
| Protein sequence | MGAALALRTG LVLRYDLGRM TTVDQLETHR AALTGHCYRM LGSAAEADDA VQETLLRAWR
SLERFEGRSS LRTWLYRIAT RVCLDALEDR ARRARPVDLG PAGTAADALE ALPGERWIEP
IPDAQAIPAD VDPAEQVLLR ESIRLAFVAA LQQLPPRQRA ALLLADVLGW SAAEIAGDLD
TSVAAVNSML QRARATLPAR DPSGPGAALS QAEAVLLERY VDAFERYDVA ALTATLREDA
CFSMPPFSLW LRGREAVAAW LTGPGAGCRG SRLVPTAASG LPAFAQYRPA GPGVHRPWAL
LVLEPAPGGI AAWTAFLDTA TLFPRFGLPS ELTS
|
|---|
| |