Gene A2cp1_3309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_3309 
Symbol 
ID7300201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp3685005 
End bp3686156 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content74% 
IMG OID643596118 
ProductABC-2 type transporter 
Protein accessionYP_002493709 
Protein GI220918405 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCCCC GACGCCCCAG GCCCTCGGCG CGCGTGCAGT TCCTGGCGGT GTTCCGCAAG 
GAGGTCCGCC AGACGGCGCG CGACAAGCGC ATGATGGCGG TGCTGGTGAT CGCGCCGCTG
CTGCAGACGG TGGTGTTCGG GTTCGCGGCG AACTTCGACG TGGACCGGGT GCGCACGGTG
GTGCTCGACC GCGACCGCAC CGACGTGTCT CGCGAGCACG CGCGGCGCCT GCTCGCCGAC
GGGACGCTGA TCCGCGCCGG CGACACCGCC TCGGCGGTCG AGGCCGAGCT GCGGGTGCAC
CGGGGCGAGG CCGCCGCGGC GGTGATGTTC CCGGAGCGGC TCGCCGCCGA CCTGGCCGCC
GGCCGGCCGG CGGAGGTGCA GGTGCTCATC GACGGCGCCG ACCCGAACCG CTCCACGGTG
GCCGCCGACG CGGTGGCGCG CTACTTCGGC GGCGTGGGCG AGCGCCTGGC GCGGGAGGCG
CTCGCCGCGC GCGGCGCCAC GCCGCCCGGC CAGCTCGCGC TCGTGCCGCG GCTCTTCTAC
AACCCCGGGC TCGACTCCCC GCCCTACATG GTCCCCGGCA TCGCGGCGCT GCTTCTGGTG
GTGGTGACCA CGATCGTGAG CGCGATGGGG CTCGCGCGCG AGCGCGAGAT GGGCACGCTG
GAGCAGGTGC TGGTCACGCC CATCCGGCCC GCCGTGCTGC TCGCCGGCAA GATCGCGCCG
TACGTGATCA TCGGGTTCGT GAACCTGGCG CTGCTGGTGG GGGTCGCCAG CCTGATCTTC
GGGGTGCCCA TCCGCGGACC GCTCCCGGTC CTGGCGCTCG GCACGCTCCT CTACCTGCTC
ACCACCCTCG GCGTGGGGCT GTTCATCTCG ACCATCTCGA AGAACCAGCA GCAGTCGTTC
CTGGGCGGCT TCCTGTTCCT GGTCCCGGCG CTGCTGCTGT CCGGCGTCAT GACGCCGGTG
GCCGCGATGC CCGGCTGGCT CCGGGCCATC ACCTTCGTGA ACCCGGTGCG CCACTTCGCC
ACCGTGATGC GCGGCTCGCT GCTGCGGGGC GCCGGCCTGG CCGACCTGGC GATCCCCCTC
ACGGCGCTCG CGGTCATCGG CTCGGCCATC TTCGTCCTCT CCGCGCTCCG CTTCCGCAAG
ACCCTGAGCT GA
 
Protein sequence
MTPRRPRPSA RVQFLAVFRK EVRQTARDKR MMAVLVIAPL LQTVVFGFAA NFDVDRVRTV 
VLDRDRTDVS REHARRLLAD GTLIRAGDTA SAVEAELRVH RGEAAAAVMF PERLAADLAA
GRPAEVQVLI DGADPNRSTV AADAVARYFG GVGERLAREA LAARGATPPG QLALVPRLFY
NPGLDSPPYM VPGIAALLLV VVTTIVSAMG LAREREMGTL EQVLVTPIRP AVLLAGKIAP
YVIIGFVNLA LLVGVASLIF GVPIRGPLPV LALGTLLYLL TTLGVGLFIS TISKNQQQSF
LGGFLFLVPA LLLSGVMTPV AAMPGWLRAI TFVNPVRHFA TVMRGSLLRG AGLADLAIPL
TALAVIGSAI FVLSALRFRK TLS