| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3194 |
|---|
| Symbol | |
|---|
| ID | 7297733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 3538083 |
|---|
| End bp | 3539273 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643596004 |
|---|
| Product | aminotransferase class V |
|---|
| Protein accession | YP_002493595 |
|---|
| Protein GI | 220918291 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC CCGTCGTCTC CGAGCTGGCG CCTCCCCTGC GCCTGCTCCT CGGCCCCGGT
CCCAGCATGG TCCACCCGCG CGTGCTCCGC GCGATGTCCA CCCCGCTGCT CGGCCACCTC
GATCCGAAGT TCCTCGAGAT CATGAACGAG GTGCAGGCGC AGCTCCGCGC CGTGTTCCGC
ACCGAGAACC CGTTCACCAT CGCGGTGTCG GGCACGGGCT CGGCCGGCAT GGAGGCGGCG
CTCGTCAACC TGCTCGAGCC GGGCGACACC GCCGTGGTGG TGGTGGCGGG CGTGTTCGGC
GGGCGCATGG CGGACATCGT GGGCCGCTGC GGCGCCCGGC TGGTGAAGAT CGACGTGCCC
TGGGGCGAGG TGTGCGATCC GGCCCGCATC GAGGAGGCGC TGAAGCGGGA GGGCAAGGTG
AAGGTGGTGG CGCTGGTCCA CGCCGAGACC TCCACCGGCG CGCACCAGCC GCTCGAGGGG
CTGGGCGCCC TGTGCCACGC GCACGGCGCG CTGCTCGTCG CGGACACGGT CACCTCGCTC
GGCGGCGTGC CGGTCGAGGT GGACGCCTGG GGCGTGGACG CGTGCTACTC CGGCACGCAG
AAGTGCCTGT CCTGCCCGCC CGGGCTGGCC CCGCTGACGC TCTCGCCGCG CGCGCTCGAG
GCGGTGAAGG CGCGCAAGAC CAAGGTGCAG AGCTGGTACC TCGACGCCGG CATGGTGGCG
GACTACTGGG CCGAGGGGAA GCGCGTGTAC CACCACACCG CGCCCATCTC GATGGTGTAC
GCGCTCCGCG AGTCGCTCCG CCTGGTGCTC GAGGAGGGGC TCGAGGCGCG CTTCGCGCGG
CACCGCCGCC ACTCCGCCGC GCTCATGGCC GGCGTCGCCG CGCTCGGGTT CGAGCCGCAG
GCGCAGGAGG GTCACCGCCT CCCGTCGCTG AACTGCATCA AGGTGCCGGC CGGCGTCGAC
GAGGCGGCCG CGCGCAAGGG CCTGCTCGCC GATCACTCCA TCGAGATCGG CGGCGGCCTC
GGCCCGCTCG CGGGCAAGGT GTGGCGCATC GGGCTCATGG GCGAGTCGGC CCGGCAGGAG
AACGTGCTCG CGGTGCTCGC CGCGATCGAG CAGGCGCTCG CGAAGCAGGG CAAGCTCGCC
CGCGCCGGCG CGTCGCTCGC CGCCGCGCTC GAGTCCTACG CGCGGTCGTA G
|
|---|
| Protein sequence | MSTPVVSELA PPLRLLLGPG PSMVHPRVLR AMSTPLLGHL DPKFLEIMNE VQAQLRAVFR
TENPFTIAVS GTGSAGMEAA LVNLLEPGDT AVVVVAGVFG GRMADIVGRC GARLVKIDVP
WGEVCDPARI EEALKREGKV KVVALVHAET STGAHQPLEG LGALCHAHGA LLVADTVTSL
GGVPVEVDAW GVDACYSGTQ KCLSCPPGLA PLTLSPRALE AVKARKTKVQ SWYLDAGMVA
DYWAEGKRVY HHTAPISMVY ALRESLRLVL EEGLEARFAR HRRHSAALMA GVAALGFEPQ
AQEGHRLPSL NCIKVPAGVD EAAARKGLLA DHSIEIGGGL GPLAGKVWRI GLMGESARQE
NVLAVLAAIE QALAKQGKLA RAGASLAAAL ESYARS
|
|---|
| |