| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3172 |
|---|
| Symbol | |
|---|
| ID | 7298168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 3515332 |
|---|
| End bp | 3517005 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643595982 |
|---|
| Product | L-lactate transport |
|---|
| Protein accession | YP_002493573 |
|---|
| Protein GI | 220918269 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1620] L-lactate permease |
|---|
| TIGRFAM ID | [TIGR00795] L-lactate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGGA CCCAGATCTA CACCCCCGTC GCCGGGAGCC TGATCGTCTC GGCGCTCGTC
GCCGCCATCC CGGTGGTCGC GCTGCTCGGC GCGCTCGCCT TCTTCCACGT GAAGGCCCAC
TGGGCCGCGC TGATCGGCCT GGTGCTGGCG CTCGGCATCG CGATCGGCGT CTACGGCATG
CCGGCGTCGA TGGCCGGCGC GGCCGCGCTG AACGGCGCCG CGTTCGGCCT GCTGCCGATC
GGCTGGATCG TGCTGAACGC GATCTTCGTC TACGACATCA CCGTCCGGAC CGGGAAGTTC
GAGGTGGTGA AGGAGACCAT CGCCGGCCTC GCCTCCGACC GGCGCATCCA GGTGCTGCTC
ATCGGCTTCT CCTTCGGCGC GTTCATCGAG GGCGCGGCCG GGTTCGGGAC GCCGGTGGCC
ATCAGCGCCG CCATGCTCAT CGGCCTCGGC TTCAAGCCGC TGCCGGCGGC GGGCCTGGCG
CTCATCGGCA ACACCGCGCC GGTCGCGTAC GGCGCCCTCG GCACCCCCAT CATCACGCTC
GCCAAGGTGA CCGGCCTGAA CGAGCTCGCG CTGTCCGCCA TGACCGGGCG CCAGCTCCCG
CTGTTCTCGC TCATCGTGCC GTTCTGGCTC GTGTGGGCGA TGTCCGGCTT CCGCGGCATG
GTCGAGGTCT GGCCGGCCTG CCTGGTGGCC GGCCTGTTCT TCGCGGTCCC GCAGTTCGTG
GTGTCCAACT TCTACGGCCC CTCGCTGGTG GACATCGTGG CCGCCGCGGT GTCGCTCCTC
GCGATGTACC TGCTGCTGAA GGTCTGGCAG CCCCGGACCG TGTGGCGCTT CCACGACGAG
CGCGACTCCG ACGCGGCCCT GGCGGCCCGG AAGTCGGTCG GCGCCGCCGC CGCGCACCGG
GCGCCCACCG GCGCGGAGGC GCTGGTGGCG TGGCTCCCCT GGATCATCCT CTCGGTGTTC
GTGTTCGCGT GGGGCCTGCC GTCGGTGAAG GCCTGGATGA ACGGCATCTT CAACCCGACC
TGGGAGGTGC CGTTCCTGCA CAACCTGGTG CACAAGGCGC CGCCGGTGTC GAAGGCGCTC
GCGCCCGAGG CGGCGAAGTA CAGCCTGAAC CTGCTCTCCG CCACCGGCAC CGGCCTGCTG
CTGTCCGGCG TGGTCTCCGG CCTCGTCCTG AAGCTCGGCC CGGGCGCGCT GCTCCGCACC
TACCTCGGCA CGCTGAAGCG GGTGCGCTTC TCGCTCGTCA CCATCGCGGC CATGCTGGCG
CTCGGGTTCA CCACGCGCTT CTCGGGGTCG GACTCGACCA TGGGGCTCGC GTTCGCCTCC
ACCGGCCACC TGTTCCCGTT CTTCTCGCCC CTGCTCGGCT GGCTGGGCGT GGCGCTCACC
GGGTCCGACA CGTCGTCGAA CGTGCTGTTC GGCAACCTGC AGGTGGTGAG CGCGCAGCAG
ATCGGCATGA ACCCGATCCT CGCGGCGGCC TCCAACAGCT CGGGCGGCGT GATGGGCAAG
ATGATCGACG CGCAGAGCAT CGTGGTCGCG TCGGTCGCGA CCGGCCAGCA CGGCCACGAG
GGGATCATCC TCCGCTACGT GTTCTGGCAC TCGCTCGTGC TCGCCTGCCT GGTCGGCGTG
GTGGTGTTCC TCCAGGCCTA CGTGTTCACC GGCATGGTCC CCATCCCGCA CTAG
|
|---|
| Protein sequence | MSWTQIYTPV AGSLIVSALV AAIPVVALLG ALAFFHVKAH WAALIGLVLA LGIAIGVYGM
PASMAGAAAL NGAAFGLLPI GWIVLNAIFV YDITVRTGKF EVVKETIAGL ASDRRIQVLL
IGFSFGAFIE GAAGFGTPVA ISAAMLIGLG FKPLPAAGLA LIGNTAPVAY GALGTPIITL
AKVTGLNELA LSAMTGRQLP LFSLIVPFWL VWAMSGFRGM VEVWPACLVA GLFFAVPQFV
VSNFYGPSLV DIVAAAVSLL AMYLLLKVWQ PRTVWRFHDE RDSDAALAAR KSVGAAAAHR
APTGAEALVA WLPWIILSVF VFAWGLPSVK AWMNGIFNPT WEVPFLHNLV HKAPPVSKAL
APEAAKYSLN LLSATGTGLL LSGVVSGLVL KLGPGALLRT YLGTLKRVRF SLVTIAAMLA
LGFTTRFSGS DSTMGLAFAS TGHLFPFFSP LLGWLGVALT GSDTSSNVLF GNLQVVSAQQ
IGMNPILAAA SNSSGGVMGK MIDAQSIVVA SVATGQHGHE GIILRYVFWH SLVLACLVGV
VVFLQAYVFT GMVPIPH
|
|---|
| |