| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3146 |
|---|
| Symbol | |
|---|
| ID | 7298142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 3476331 |
|---|
| End bp | 3477476 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 643595956 |
|---|
| Product | type I topoisomerase |
|---|
| Protein accession | YP_002493547 |
|---|
| Protein GI | 220918243 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3569] Topoisomerase IB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.139598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGGGA TGCGCGCCAT CGAGAGGCTC CAGGAGATCG GGCTGCGCCG CGCCGGCACG
CCGCGCACCG GGTTCCGCTG GGTCCGCCCG GACGGCCGCC CGGCGGCCGC GGAGGACGCC
GAGCGCGCGC GGCGCCTCGC GCTGCCGCCG GCGTGGACGG ACGTGCGGGT CAGCCCGGTC
GCCGGCGCCA AGCTGCAGGC GATCGGCCGG GATCGCGCCG GACGCTGGCA GTACCGCTAT
CACCCGGAGT TCATGCGCCG CCGCTCCGGG GCGAAGTACC GGCGGCTGCT CCGCTTCGCC
GCCGCGCTCC CGAGGATCCG CGCGCGCGTG ACCCGCGACC TGCGCCGCCG CGGCCTGGGG
CGGGAGCGGG TGCTCGCGGC GATGGTGCGG ATCCTCGCCA CCTGCCCGAT GCGGCCGGGC
AGCGAGGCGT ACGCGCGCGA GCACGGGAGC TACGGGCTCA CCACGGTCCG GCCCCGGCAC
GTGCGCGTGC AGGGCGACCG GCTCGTGTTC GACTACCGCG GCAAGTCCGG CAAGCGGCAG
GTGCGCGAGC TGGAGGACGC GCCGGTGGCG CGGCTGGTGC GCACGCTGCT GCGAGTGCCG
GGGCGCGACG TGTTCAAGTT CGAGGAGGAG GGCGAGGTGG TGGACGTGCG GCGCCGCCAC
CTGAACGCGT ACCTGCGCGA GGCGGCGGGG GCGCCGTTCA CCGCGAAGGA CTTCCGGACC
TGGGCCGGCA CGGTGCTCTG CGCGAGCGAG CTGGCGCGGC GGGAGCGGGA GATCGTCCCG
GGTCGGACCA GCCGGCGGCA GCTCGAGGTC GCCGCGGTGA AGGTCGTCGC GGGCAGGCTC
GGCAACACGC CGTCGGTGGC GCGCGCCTCG TACGTGAGCC CGGCCGTGCT GCAGGCGTTC
GGGCGGGGGA AGGTGATCGG CTGCTGCTAC GCGCCGGACG AGGTCGGCGT GGCCGTGACG
CGCGGGTTGC ACCGGGTCGA GGCGGCGCTG GTCCGGCTCC TGCGCGAGGA GGAGGCGCCG
GCCCCGAGGG CCGGGGCGGC GCCGGCGTCC CGCGTCGGGG GCGCGCCCAT CGCCCGCCCG
GCCGGGAGGC CCGGCTTCGC CGCGCGCGAC CGGATCCGCG CGGCGGCGCG GGCGCCGGCC
CCGTGA
|
|---|
| Protein sequence | MEGMRAIERL QEIGLRRAGT PRTGFRWVRP DGRPAAAEDA ERARRLALPP AWTDVRVSPV
AGAKLQAIGR DRAGRWQYRY HPEFMRRRSG AKYRRLLRFA AALPRIRARV TRDLRRRGLG
RERVLAAMVR ILATCPMRPG SEAYAREHGS YGLTTVRPRH VRVQGDRLVF DYRGKSGKRQ
VRELEDAPVA RLVRTLLRVP GRDVFKFEEE GEVVDVRRRH LNAYLREAAG APFTAKDFRT
WAGTVLCASE LARREREIVP GRTSRRQLEV AAVKVVAGRL GNTPSVARAS YVSPAVLQAF
GRGKVIGCCY APDEVGVAVT RGLHRVEAAL VRLLREEEAP APRAGAAPAS RVGGAPIARP
AGRPGFAARD RIRAAARAPA P
|
|---|
| |