| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3145 |
|---|
| Symbol | |
|---|
| ID | 7298141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 3475413 |
|---|
| End bp | 3476315 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643595955 |
|---|
| Product | glycoside hydrolase family 16 |
|---|
| Protein accession | YP_002493546 |
|---|
| Protein GI | 220918242 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0544499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACCCGC TGATCCGGCC CGCGATGGCC GCCGCGCTCG CCGTGGCGTG CGGGTGCGGC
CTGCTCTCGC CGGGCGAGCC GCCCGCCGCG CCCACCGCGC CGGTGCCCGG GTGGACGGCG
CCGGACGCCC CCATCCCGGC GCCGCCGCCG CCCGCCGGCG TGGCGCCGGA GGCGCCGCTC
CCCGGCTACG CGCTCGCGTG GCACGACGAG TTCGACGGGA CGGCGGTGGA CCCGGCGCGC
TGGAACGTGG AGGCCCGCCA CTGGCGCGAC GCGCTCAACG ACCCGGCGGC GGTCACCGTG
CAGGATGGCC TGCTGCGGAT CACGACCTTC ACCGACGAGG CCGGCGTCCA CCACACCGGA
TATCTCCAGA CGGTCGGCCT GTTCGAGCTG ACCTACGGCT ACCTGGAGGC GCGCATCCGC
TTCCACGAGG TGCCCGGCAC CTGGTGCGCG TTCTGGCTCT ACCCGGAGAC GTACGGCCAC
CCCATCGGCG ACCCCGGCAC CGCCGGCGTG GAGATCGACG TCGTGGAGCA CCGGGTGGTG
GACGGCGGCG GCTGGAACGT GCGCGACCTG GTGATGTCGG GCATCAACTG GGACGGCTTC
GGCCCGGACT GGAAGAAGGT GCACCGGACC CAGCCGCCGC CCGACGGCGG GCCGGTGTGG
GGCGCGTGGC GCACCTTCTC GGTCCTCTGG ACGCCCGCGG GCTACACGTT CTACGTGGAC
CAGCAGCCGC TCTGGAGCAC CTCGGCCGCG GTGTCGCACC GGTCCCAGCC CATCTACCTC
ACCTGCGAGG TGAAGCAGCG GAGCTGGGCC GGGACGATCC CCGCCGGCGG CTACGGACCC
GCGGCGACGA GCGACGACTT CATGGAGGTG GACTGGGTGC GCGCGTGGCA GCCGGCGCCC
TGA
|
|---|
| Protein sequence | MDPLIRPAMA AALAVACGCG LLSPGEPPAA PTAPVPGWTA PDAPIPAPPP PAGVAPEAPL
PGYALAWHDE FDGTAVDPAR WNVEARHWRD ALNDPAAVTV QDGLLRITTF TDEAGVHHTG
YLQTVGLFEL TYGYLEARIR FHEVPGTWCA FWLYPETYGH PIGDPGTAGV EIDVVEHRVV
DGGGWNVRDL VMSGINWDGF GPDWKKVHRT QPPPDGGPVW GAWRTFSVLW TPAGYTFYVD
QQPLWSTSAA VSHRSQPIYL TCEVKQRSWA GTIPAGGYGP AATSDDFMEV DWVRAWQPAP
|
|---|
| |