| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3082 |
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| Symbol | |
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| ID | 7297812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | - |
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| Start bp | 3403768 |
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| End bp | 3405687 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643595892 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_002493483 |
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| Protein GI | 220918179 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.85555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAAGG AGCTCTGGTT CGGCCTCGGC ATGATGGCGG TGATCGTCGC GATCACCGCG
TGGATCATGC CCGCCCCGGC GCAGATGACC GGCGGCCACC TCGGGCTGCT CATGCTGTCG
CTCGTGGTGG TCGCGATCAT GCTGGGCTTC CCCACCGCGT TCACGCTCAT GGGCATGGGC
GTGCTCTTCG CGTGGCTGGC GTACCGCTTC GACAACCCCG CCATCGCCAC GCAGCAGACG
CTCGACCTCA TGGTCCAGCG GACCTACGCG GTGATGACGA ACGACGTCCT CATCTCGATC
CCGCTGTTCG TGTTCATGGG GTACCTCGTC GAGCGGGCCA ACCTCATCGA GCGGCTGTTC
AAGAGCCTCC ACCTCGCCAT GGCCTTCGTG CCGGGGTCGC TCGCGGTCGC CACGCTCGCC
ACCTGCGCGC TGTTCGCGAC CGCCACCGGG ATCGTCGGCG CGGTGGTGAC GCTCATGGGC
CTGCTCGCCT TCCCGGCGAT GCTCCGCTCC GGCTACGACA TCAAGCTCTC CGCGGGGGCG
ATCACCGCGG GCGGCTGCCT CGGCATCCTC ATCCCGCCCT CGGTGATGCT CATCCTGTAC
GGCGCCACCG CCGGCGTCTC GGTGGTCCAG CTGTACGCGG GCGCGTTCTT CCCCGGCCTG
CTGCTCGCCG GCCTGTACAT CGCGTACGTG GTGCTGATCG CGCGGCTCCG GCCGTCGCTC
GCCCCGCCGG CCACGCTGGA GGAGCGGACG GTCACGCTGC CGGAGCCCTC TCGGATCCTG
GCGGGCGGGC GGCGCCGGCT GGCCGTCCCG GCGCTGCTCG GGGCGCTGGC GCGCCCGCGG
CCCGGCGTCG GGCGCCGCTG GGCGGGGCGC CAGCTCGCCG CCGCGCTCCT GCCGGCGGCC
GCGCTGGCCG CCGGGATCGG CGTCGTGCAC GGCGTCGTGA CCGCCGAGCG CGTGGTGGAC
ACCGGCGGCC TCGTCGAGGT GGGCGACGGC GACGCGGCGG CCGAGGAGAC GTACCAGGGG
GCGGAGCTCG CGCCGCTCGA GGACGACGGC GCTCCGGCGG AGGCCGGGGC CGAGCCGGTG
CCGACCGCAG GGGACGACGC GAAGGTGGAG GAGGTCCGCG AGGCCGGCGC GGAGGCGCGG
GTGCCGGCGG CGCCGGCGGA CCGCAAGCCC GCCCCGGCGG CGTTCTGGAT CGCGGTCGCT
GCGGCGCTGG CCGCGCTCGC CGTGCACTAC GGCATCTTCA CGCTCGAGCG GCTCGAGATC
CTGAAGATGC TGCTCACCAG CTTCTTCCCC CTGACCACGC TCATCCTCGC CGTGCTCGGA
TCGATCGTGT TCGGGTGGGC CACGCCGACC GAGGCGGCCG CGCTCGGCGC CGCCGGCGCG
ATGGTCCTCA CCGGCGCCTA CCGGCAGTTC AGGTGGTCGG TGCTGAAGGA GTCGGTGTTC
CTGACCGCGA AGACCACGGC CATGGTGTGC TGGCTGTTCG TGGGCTCGTC GATCTTCTCG
GCGGCGTTCG CGCTGCTCGG GGGCCAGGGG CTCATCGAGC GGTGGGTGCT CGGGCTCGAC
CTCACGCCCA TCCAGTTCAT GGTGCTGGCG CAGGCGATCA TCTTCCTGCT CGGCTGGCCG
CTGGAGTGGA CCGAGATCAT CGTGATCTTC ATGCCCATCT TCATCCCGCT GCTCGGGCAC
TTCCAGATCG ATCCGCTCTT CTTCGGCCTC CTGGTGGCGC TCAACCTCCA GACGGCGTTC
CTCTCGCCCC CGGTGGCCAT GGCGGCGTTC TACCTGAAGG GCGTCGCGCC GCGGCACGTG
ACCCTGAACC AGATCTTCGC CGGGATGATG CCGTTCATGG CCATCCAGAT CCTGGCGCTG
GTGCTGCTCT ACGTGTTCCC GCAGATCGGG CTCTGGCTGC CGCGCGTTCT CTATCGGTGA
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| Protein sequence | MRKELWFGLG MMAVIVAITA WIMPAPAQMT GGHLGLLMLS LVVVAIMLGF PTAFTLMGMG
VLFAWLAYRF DNPAIATQQT LDLMVQRTYA VMTNDVLISI PLFVFMGYLV ERANLIERLF
KSLHLAMAFV PGSLAVATLA TCALFATATG IVGAVVTLMG LLAFPAMLRS GYDIKLSAGA
ITAGGCLGIL IPPSVMLILY GATAGVSVVQ LYAGAFFPGL LLAGLYIAYV VLIARLRPSL
APPATLEERT VTLPEPSRIL AGGRRRLAVP ALLGALARPR PGVGRRWAGR QLAAALLPAA
ALAAGIGVVH GVVTAERVVD TGGLVEVGDG DAAAEETYQG AELAPLEDDG APAEAGAEPV
PTAGDDAKVE EVREAGAEAR VPAAPADRKP APAAFWIAVA AALAALAVHY GIFTLERLEI
LKMLLTSFFP LTTLILAVLG SIVFGWATPT EAAALGAAGA MVLTGAYRQF RWSVLKESVF
LTAKTTAMVC WLFVGSSIFS AAFALLGGQG LIERWVLGLD LTPIQFMVLA QAIIFLLGWP
LEWTEIIVIF MPIFIPLLGH FQIDPLFFGL LVALNLQTAF LSPPVAMAAF YLKGVAPRHV
TLNQIFAGMM PFMAIQILAL VLLYVFPQIG LWLPRVLYR
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