| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_3075 |
|---|
| Symbol | |
|---|
| ID | 7297805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 3397736 |
|---|
| End bp | 3398926 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643595885 |
|---|
| Product | transcriptional regulator, CadC |
|---|
| Protein accession | YP_002493476 |
|---|
| Protein GI | 220918172 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3710] DNA-binding winged-HTH domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCGCA TGACCTGGCG GTTCGGAGCG TACGAGCTCG ACCCGGCGCG GCGCGAGCTG
CGCGTCGCCG GGGAGCCGAG GGCGCTCCAG CCGCAGGTCT TCGAGGTGCT CACCTACCTC
GTCCGCAACC GGCATCGCCT GGTCGTGAAG GACGAGCTGC TGCGGGAGCT CTGGCCGGAC
GCGATCGTCA CCGACGCGTC GCTGCAGCGC GCGGTGAGCC TCGCGCGCCG CGCGCTCCGC
CCGGCGGATC GCGGCCTGCT GCGCACGCAC GCGCGGCAGG GATACCGGTT CGTGGGCGAG
GTCGTGGAGA CCGAGCCGGA CCCGGCCGAC ACGGCGGCGG AGGCGCGCCC TGCCTACGTC
CGCTCCGGCG ACGTCCACGT GGCGTACCGC ACCGCCGGAC ACGGTCCACT CGACGTGGTC
CTGGTGCTCG GGTGGTCGCT GGGCATGCGC GCCGCCCTCG AGCTGCGGGG AGCGTCCGAG
CTCGTCCGGG CGCTCTCCGC GCGCGCCCGC GTGATCCTGT TCGACAAGCG CGGGACGGGT
GCGAGCGACC GCGTGAAGGC GTTGCCGGAG CTGCCGCAGC GGGTCGAGGA CCTCGAGGCG
GTCCTCGACG CGGTGCGGTC CCCGGGCGCC GTGCTCGTCG GGTTCTCCGA GGGTGGCCCG
CTGGCGCTCA CGTTCGCCGT GACCCGTCCG CTCCGCGTGC GCGGCCTCGC CCTCGTCGGC
GCCTTCGCCC GCATGTCGGC CGCGCCGGAC CACCCTGCCG GCTGGAGCGG GGCCGAGATC
GCGTCGCTGC GCGCGTACAT CGCGCGGGGC TGGGGCGCCG GCGCGACGCT GCAGGCGATC
GTTCCCGCCC GCCACCTCTC GGCGCCGCTC CGCGTCTGGG CCGCCCGGGC CGAGCAGGAG
GGCGCGAGCC CCGGCGCGGC GCTCGAGCTC CTGGAGATGA ACCTCGGGAT CGACGTCCGG
CCGCTGCTGG CGCGGGTGCG AGCGCCCGCC GTCGTGCTGC ACGCGACCGG CGACCACGTC
GTCCGCGTCG GGAACGGGCG CGCGCTCGCC GCGGAGATCC CCGGCGCACG CCTCGTCGAG
GTCCCCGGCG AGGACCACGC GTTCCTGTTC GGCGGCCGGC CGACCCTCGA GCGCGAGCTC
CTGGCGCTCC TCGCGCGGGC GGCCGCCCGG CCCCGGCCCG CGCTCACCTG A
|
|---|
| Protein sequence | MGRMTWRFGA YELDPARREL RVAGEPRALQ PQVFEVLTYL VRNRHRLVVK DELLRELWPD
AIVTDASLQR AVSLARRALR PADRGLLRTH ARQGYRFVGE VVETEPDPAD TAAEARPAYV
RSGDVHVAYR TAGHGPLDVV LVLGWSLGMR AALELRGASE LVRALSARAR VILFDKRGTG
ASDRVKALPE LPQRVEDLEA VLDAVRSPGA VLVGFSEGGP LALTFAVTRP LRVRGLALVG
AFARMSAAPD HPAGWSGAEI ASLRAYIARG WGAGATLQAI VPARHLSAPL RVWAARAEQE
GASPGAALEL LEMNLGIDVR PLLARVRAPA VVLHATGDHV VRVGNGRALA AEIPGARLVE
VPGEDHAFLF GGRPTLEREL LALLARAAAR PRPALT
|
|---|
| |