Gene A2cp1_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_3009 
Symbol 
ID7298225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp3332847 
End bp3334184 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content69% 
IMG OID643595819 
Producttype II secretion system protein E 
Protein accessionYP_002493410 
Protein GI220918106 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTGA GTGACCGGCT GCGGCAGGGA CCGGTGGCGG ACCCCCCGCA GAACGAGCCC 
GCGGTGGCGA GCGAGGCCTT CCGGGACATG AAGGGCGACC TCCACCGCCG CCTGGTGGAC
CGGCTCGACC TGAAGGCGCT CGAGCGCCTT CCCGCAGAGC GACTCCAGGA CGAGCTGCGC
GGCATCGTGG CCGGGATGGT GAGCGGCGCC GGGGTACCGC TCAACCAGGC AGAGCGTGAC
CGGCTGGTCC AGGAGATCCT TGACGAGGTG ACGGGGCTCG GTCCGCTCGA GCCGCTGCTC
GCGGATGGCT CCATCTCCGA CATCCTGGTG AACACGGCCG AGACGGTCTA CGTCGAGCGG
AACGGCAAGC TCGAGCTGAC GCGCGTGCGC TTCGACTCCA ACGACCACCT CATGCAGGTG
ATCAACCGGA TCGTCTCGCG CGTCGGGCGG CGCGTGGACG AGACGTCACC GATGGTCGAC
GCACGCCTGC CGGACGGCTC GCGCGTCAAC GCGATCATCC CGCCCCTCGC CATCGACGGC
GCCATCCTCT CGATCCGCCG GTTCGGGCGC TCGCCGCTTC GCGTCCGCGA CCTGCTCACG
ATCGGCTCCG TCACGCGTGA GGCCGTCTCC TTCCTCGCCG CGTGCGTCAC CGCCAGGCTG
AACGTCCTCG TCAGCGGGGG CACCGGCAGC GGCAAGACGA CCATGCTGAA CGCGCTGTCC
GCGTTCATCC CGCCCTCCGA GCGCATCGTC ACGATCGAGG ATTCGGCCGA GCTGCAGCTC
CAGCAGCCGC ACGTGGTCCG GCTGGAGACC CGGCCGCCCA ACATCGAGGG CAAGGGCGAG
ATCATCGCGC GCGACCTGGT GCGGAACTCG CTCCGAATGC GGCCGGACCG GATCATCGTC
GGCGAGGTCC GGAGCTCGGA GGTCCTCGAC ATGCTCCAAG CCATGAACAC CGGCCACGAC
GGCTCGATGA CCACGATCCA CGCGAACTCT CCGCGGGACG CGCTCACGCG TCTCGAGGCG
ATGATCGCGA TGGGCGGGAT CCAGCTCCCC GAGGCGGCCA GCCGGCAGAT GATCTCGCGG
GCCATCAACA TCATCGTCCA GCTCAACCGC GGCGCGGACG GGCACCGCCG GCTCGTCAGC
GTGGGCGAGA TCACGGGGAC CGAGGGGCCC ACCATCACGA TGCAGGAGAT CTTCCGGTTC
GACCAGAAGG GCGTGGACGA GCGCGGCAAG ATCGTCGGCC AGCTCGTCGC GACCGGGATC
CGGCCGAAGG TGATGAACCG CATCCAGGTG TCCGGGATCG ACGTCGCCCA CATCCTCGAT
CCCTTCCTGC AGGACTGA
 
Protein sequence
MRLSDRLRQG PVADPPQNEP AVASEAFRDM KGDLHRRLVD RLDLKALERL PAERLQDELR 
GIVAGMVSGA GVPLNQAERD RLVQEILDEV TGLGPLEPLL ADGSISDILV NTAETVYVER
NGKLELTRVR FDSNDHLMQV INRIVSRVGR RVDETSPMVD ARLPDGSRVN AIIPPLAIDG
AILSIRRFGR SPLRVRDLLT IGSVTREAVS FLAACVTARL NVLVSGGTGS GKTTMLNALS
AFIPPSERIV TIEDSAELQL QQPHVVRLET RPPNIEGKGE IIARDLVRNS LRMRPDRIIV
GEVRSSEVLD MLQAMNTGHD GSMTTIHANS PRDALTRLEA MIAMGGIQLP EAASRQMISR
AINIIVQLNR GADGHRRLVS VGEITGTEGP TITMQEIFRF DQKGVDERGK IVGQLVATGI
RPKVMNRIQV SGIDVAHILD PFLQD