Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3009 |
Symbol | |
ID | 7298225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 3332847 |
End bp | 3334184 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643595819 |
Product | type II secretion system protein E |
Protein accession | YP_002493410 |
Protein GI | 220918106 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTGA GTGACCGGCT GCGGCAGGGA CCGGTGGCGG ACCCCCCGCA GAACGAGCCC GCGGTGGCGA GCGAGGCCTT CCGGGACATG AAGGGCGACC TCCACCGCCG CCTGGTGGAC CGGCTCGACC TGAAGGCGCT CGAGCGCCTT CCCGCAGAGC GACTCCAGGA CGAGCTGCGC GGCATCGTGG CCGGGATGGT GAGCGGCGCC GGGGTACCGC TCAACCAGGC AGAGCGTGAC CGGCTGGTCC AGGAGATCCT TGACGAGGTG ACGGGGCTCG GTCCGCTCGA GCCGCTGCTC GCGGATGGCT CCATCTCCGA CATCCTGGTG AACACGGCCG AGACGGTCTA CGTCGAGCGG AACGGCAAGC TCGAGCTGAC GCGCGTGCGC TTCGACTCCA ACGACCACCT CATGCAGGTG ATCAACCGGA TCGTCTCGCG CGTCGGGCGG CGCGTGGACG AGACGTCACC GATGGTCGAC GCACGCCTGC CGGACGGCTC GCGCGTCAAC GCGATCATCC CGCCCCTCGC CATCGACGGC GCCATCCTCT CGATCCGCCG GTTCGGGCGC TCGCCGCTTC GCGTCCGCGA CCTGCTCACG ATCGGCTCCG TCACGCGTGA GGCCGTCTCC TTCCTCGCCG CGTGCGTCAC CGCCAGGCTG AACGTCCTCG TCAGCGGGGG CACCGGCAGC GGCAAGACGA CCATGCTGAA CGCGCTGTCC GCGTTCATCC CGCCCTCCGA GCGCATCGTC ACGATCGAGG ATTCGGCCGA GCTGCAGCTC CAGCAGCCGC ACGTGGTCCG GCTGGAGACC CGGCCGCCCA ACATCGAGGG CAAGGGCGAG ATCATCGCGC GCGACCTGGT GCGGAACTCG CTCCGAATGC GGCCGGACCG GATCATCGTC GGCGAGGTCC GGAGCTCGGA GGTCCTCGAC ATGCTCCAAG CCATGAACAC CGGCCACGAC GGCTCGATGA CCACGATCCA CGCGAACTCT CCGCGGGACG CGCTCACGCG TCTCGAGGCG ATGATCGCGA TGGGCGGGAT CCAGCTCCCC GAGGCGGCCA GCCGGCAGAT GATCTCGCGG GCCATCAACA TCATCGTCCA GCTCAACCGC GGCGCGGACG GGCACCGCCG GCTCGTCAGC GTGGGCGAGA TCACGGGGAC CGAGGGGCCC ACCATCACGA TGCAGGAGAT CTTCCGGTTC GACCAGAAGG GCGTGGACGA GCGCGGCAAG ATCGTCGGCC AGCTCGTCGC GACCGGGATC CGGCCGAAGG TGATGAACCG CATCCAGGTG TCCGGGATCG ACGTCGCCCA CATCCTCGAT CCCTTCCTGC AGGACTGA
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Protein sequence | MRLSDRLRQG PVADPPQNEP AVASEAFRDM KGDLHRRLVD RLDLKALERL PAERLQDELR GIVAGMVSGA GVPLNQAERD RLVQEILDEV TGLGPLEPLL ADGSISDILV NTAETVYVER NGKLELTRVR FDSNDHLMQV INRIVSRVGR RVDETSPMVD ARLPDGSRVN AIIPPLAIDG AILSIRRFGR SPLRVRDLLT IGSVTREAVS FLAACVTARL NVLVSGGTGS GKTTMLNALS AFIPPSERIV TIEDSAELQL QQPHVVRLET RPPNIEGKGE IIARDLVRNS LRMRPDRIIV GEVRSSEVLD MLQAMNTGHD GSMTTIHANS PRDALTRLEA MIAMGGIQLP EAASRQMISR AINIIVQLNR GADGHRRLVS VGEITGTEGP TITMQEIFRF DQKGVDERGK IVGQLVATGI RPKVMNRIQV SGIDVAHILD PFLQD
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