| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2980 |
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| Symbol | |
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| ID | 7298196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | + |
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| Start bp | 3302815 |
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| End bp | 3303897 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 643595792 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_002493383 |
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| Protein GI | 220918079 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0252324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACACGG ACGCCCCACG CCCTCGGGAC GGGCTCGCGG CCCGGCTGCG CGCCGCGCCC
GGCACGGTGG CCCTCGCCGC CGCGGATCTC GCCGTCTTCG GGTGGGTGGC GGCCCATGGC
TCCACGACCG ACCCCGCGCT CCTCGCCCGA ATGGGCGCGC TCGACCATGC GCGCGTGTGG
GATGGCGAGC CCTGGCGCCT CCTCACCGCC GCGTTCCTGC ACGTCGGCCC CGTTCACCTG
GTGTGGAACC TGGCGTTCGG GGTGCCGCTC TGCGCGCTGG TGGAGCGGGC CATCGGCACC
CGCCGCTTCC TCGCCGTGTA CGTGGCGAGC GCGCTGGGCG GCTCCGCCGC CTCGATGCTG
GCCGCGATGC CGATGTCGGC GGGCGCCTCG GGGGCGCTGT TCGGCGTCGC CGGCGCCATG
CTGGCGCTGT ACCGGCGCGC GGTGGGGTCC TGGCGCGCGT TCCTCGCCTC GCGCGACATC
ATCCTGAACG GGATCCTGCT CGTCGGGTTC GCGCTGGCGG GGCTGTTCCT GCCCATCGAC
GGGTGGGCGC ACGCCGGCGG GCTCGCCACC GGCGCTTGGC TCGGCTGGAT CGCCTCGCGC
CCGGCGCCCC GTCGAGCCCG GGCCTGGCTC CCGCCCGCCG CCGCGCTCGG CCTCGCGATC
GCGCTGGCGC TGCGACCCGA TCCCCGGTGG GCGGCGAACC GCAGCGAGCT GGAGGCGATG
CACGCCGCGC TGCGCGACGG CGACCGCACG CGGGCGCGCG CGGTGCTGGA CGCCGCGCGC
GCCCGCGGCA ACGACGCCGC CGGGCTGCCG TACTACGAGG GGCTGCTGCT CGCGCAGGAG
GGGGATCTCG ACGGTGCGCT GGAGCGGCTG CGGCCGCTCG CGTCCGCCGC GCAGGGTCCG
GCGGGCGAGG AGGCGCGGAG GGCGCTCGCC GCGGTGGCGA AGCGCCTGGG CGTGCTGCTC
GTGGTCGGCG ACGGGCGCCC GCCCGATCCG GCGCGCGGCC GGGCGCTGCT CGACGAGGCC
TGTGGCGCCG GGGACGCGGA CGCCTGCCGG CTCGCCGCCG ACGCCGCCGC GCTGGATCGG
TGA
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| Protein sequence | MHTDAPRPRD GLAARLRAAP GTVALAAADL AVFGWVAAHG STTDPALLAR MGALDHARVW
DGEPWRLLTA AFLHVGPVHL VWNLAFGVPL CALVERAIGT RRFLAVYVAS ALGGSAASML
AAMPMSAGAS GALFGVAGAM LALYRRAVGS WRAFLASRDI ILNGILLVGF ALAGLFLPID
GWAHAGGLAT GAWLGWIASR PAPRRARAWL PPAAALGLAI ALALRPDPRW AANRSELEAM
HAALRDGDRT RARAVLDAAR ARGNDAAGLP YYEGLLLAQE GDLDGALERL RPLASAAQGP
AGEEARRALA AVAKRLGVLL VVGDGRPPDP ARGRALLDEA CGAGDADACR LAADAAALDR
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