| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2951 |
|---|
| Symbol | |
|---|
| ID | 7299883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 3263315 |
|---|
| End bp | 3263947 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643595763 |
|---|
| Product | polysaccharide export protein |
|---|
| Protein accession | YP_002493354 |
|---|
| Protein GI | 220918050 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATC CGCTCGCTGC CACCGCGCGC CGTCGCGCGG GCCTCGCGCT CGCCGCCGTC
GCCGCCACCG CCCTCGCCGC CTGCGGGCCG ACCGGCCGTT ACGTGCGCGC CGAGGACCTG
CCGCCCGCGC CGGCCGACGC CGAGTACCGC GTCGCGCGCG GCGACGTCGT CGGGATCCGG
GTCTGGAACC AGGACAACAT GTCGGTGGAG CGAACGCGCG TCCGCGAGGA CGGGCGCGTG
TCGATGCCGT TCCTCCAGGA CGTCCCGGCG GCGGGGAGCA CGCCGACCGA GCTCTCCCAG
CGGATCCAGA CGCAGCTCAA GACCTACGTC GTGAACCCCG TCGTCACCGT GACGGTGGTC
GAGATGCAGC CGCTGCGCGT CTCCGTCACC GGCGAGGTGA TCCGGCCCGG CGTCTACGAC
CTGGATCGCG GGGCGGGCGT GCTCTCCGCG CTCGCCGCGG CCGGCAGCTT CACCGAGTTC
GCCCACCGGG ACCGCGTCTT CGTCCTGCGC CACGGCCCGG CCCCGGGCGA CGCGGTGACG
CGCATCCGCT TCGAGTACGA CGCGCTCGTC CGCGCCGACC GGCGATCGGC CGGGTTCCGG
CTCCAGCCCG GCGACGTGGT CGTGGTGGAG TGA
|
|---|
| Protein sequence | MIDPLAATAR RRAGLALAAV AATALAACGP TGRYVRAEDL PPAPADAEYR VARGDVVGIR
VWNQDNMSVE RTRVREDGRV SMPFLQDVPA AGSTPTELSQ RIQTQLKTYV VNPVVTVTVV
EMQPLRVSVT GEVIRPGVYD LDRGAGVLSA LAAAGSFTEF AHRDRVFVLR HGPAPGDAVT
RIRFEYDALV RADRRSAGFR LQPGDVVVVE
|
|---|
| |