Gene A2cp1_2926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_2926 
Symbol 
ID7299857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp3239491 
End bp3240669 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content79% 
IMG OID643595737 
Productriboflavin biosynthesis protein RibD 
Protein accessionYP_002493329 
Protein GI220918025 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID[TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCAC GCGCGGCGCC GTCGGGGTGG CGGGCGAGCG CCCGCGCGCC CGCGCCCGTC 
GCCGGCGCGG AGGCGGAGCG CTTCATGCGC CTGGCCGTGC GCGAGGCGGC GCGCGGGCTG
GGGCGCACCA GCCCGAACCC CGCGGTGGGC GCGGTGGTGG TCCGCGACGG GCGCGTGGTC
GGGCGAGGCC ACCACGCGCG CGCCGGCGGG CCGCACGCCG AGGTGGTGGC GCTCCGGGCC
GCCGGGGCGC TGGCGCGCGG GGCGGACGTG TACACCACGC TCGAGCCCTG CGATCACTTC
GGCAAGACGC CGCCCTGCTC GGTGGCGCTG CTCGAGGCCG GGGTGCGGCG GGTGTTCGTG
GGCTCGAGCG ACCCGAACCC GCTGGTGAAC GGGCGCGGGA TGGCCCGGCT CCGCCGGCAC
GGCGTGGCGG TGGTGAAGGG CGTGCTGCGC GACGCGTGCG ACCGCCTCAA CGCGCCCTGG
TTCACGTTCA TCACCGAGGG TCGGCCGTTC GTGACGCTGA AGGCGGCGGT GACGCTCGAC
GGCCGCATCG CCACCCGCAC CGGCGACGCG CGCTGGGTGA GCGGCGAGGC GGCGCGCGCC
TGGGTGCACC GGCTCCGCGA CCGGGTGGAC GCGGTGCTGG TGGGCGCCGG GACGGCCCGG
GCCGACGACC CGCGGCTCAC CACGCGCCTG CCGCGCGGCG GCCGCGACCC GATCCGCGTC
GTGCTCGACA GCGATCTCTC GCTGCCGCGG ACGCTGGCGC TGTTCCGCGG CGGCTCGCCG
GCCCCGACGC TCGTGGCGCA CGCGTCTGCC GCGCCGGCGC GCCGGTACGG GCCCGGCGTG
GAGCTCGTGC GCTGCCGCCG CGGGAAGGGC GGGGTGGACC TGCGGGACCT GCTCGCGAAG
CTCGCCGCGC GCGGCGTCGC GCACCTGCTC GTGGAGGGCG GCGCGCACGT CCACGCGCGC
TTCCTCGAGG CCGGCCTGGT GGACCGGGTG GCCGTCTTCG TCGCGCCGAA GATCGCGGGC
GGGGACGGCG TGCCGCTCGT GGCGGGCCGC GGGCCGGCGC GGATGGCGGA CGCGCTGCGC
CTGGAGCAGG TGGCGTTCGA GCGGGTGGGC GACGACCTGC TCGTCACGGG CGTCCCCGCG
CGCCGCGCCG CGTTGGCCAA AAACCCCCAA CGAGGCTAG
 
Protein sequence
MTARAAPSGW RASARAPAPV AGAEAERFMR LAVREAARGL GRTSPNPAVG AVVVRDGRVV 
GRGHHARAGG PHAEVVALRA AGALARGADV YTTLEPCDHF GKTPPCSVAL LEAGVRRVFV
GSSDPNPLVN GRGMARLRRH GVAVVKGVLR DACDRLNAPW FTFITEGRPF VTLKAAVTLD
GRIATRTGDA RWVSGEAARA WVHRLRDRVD AVLVGAGTAR ADDPRLTTRL PRGGRDPIRV
VLDSDLSLPR TLALFRGGSP APTLVAHASA APARRYGPGV ELVRCRRGKG GVDLRDLLAK
LAARGVAHLL VEGGAHVHAR FLEAGLVDRV AVFVAPKIAG GDGVPLVAGR GPARMADALR
LEQVAFERVG DDLLVTGVPA RRAALAKNPQ RG