| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_2885 |
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| Symbol | |
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| ID | 7299816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | - |
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| Start bp | 3186497 |
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| End bp | 3188992 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643595696 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002493288 |
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| Protein GI | 220917984 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.106774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAGAG AGCCGAAGAC GGGCGCGGTC GCGGTCAAGA AGAAGAAGGC CGCGGCGGCC
CCGAAGGAAG CGACGGCCGT CGCCGAGGCG GAAGCCCCGA AGACCCCCCG CCGCCCAGCG
CGGAAGACCT CCACCGGGAC CAGCCTGGTG GTGGTGGAGT CGCCCGCGAA GGCGAAGACC
ATCAAGAAGT ACCTGGGGCG GTCGTTCGAC GTGAAGGCGT CGGTCGGTCA CGTGAAGGAT
CTGCCCAAGT CGAAGATCGG CGTGGACGTC GAGAAGGGCT TCCTCCCCGA GTACGACGTC
ATCAAGGGGA AGGCGAAGGT CCTCTCGGAG ATCAAGCGCG CGGCGCGGAC CGCCGACCAC
GTCTTCCTCG CGACCGACCC CGATCGCGAG GGCGAGGCCA TCGCCTGGCA CATCTCCGAG
GAGCTCGGCG CCGAGGGCGG CGACGCCCGG GTGCGCCGGG TGCTCTTCAA CGAGATCACC
AAGACGGCCA TCCAGAAGGC CATCGAGAAG CCGCTCGACC TCGACCGCAA GAAGTTCGAC
TCGCAGCAGG CCCGCCGGAT CCTCGATCGC CTGGTCGGCT ACCAGATCAG CCCCATCCTC
TGGAAGAAGG TCCGCCGCGG CCTGTCCGCC GGCCGGGTGC AGTCGGTGGC GGTGCGGCTG
GTGGTGGAGC GCGAGCGCGA GATCGAGGCG TTCGTGCCGG TGGAGTACTG GTCGCTCGAC
GCCGACCTCG CCGCGCGCGT CCCGCCCGAC TTCCGCGCCA AGATCTTCAA GGTGGACGGC
CAGAAGGCCG ACCTGAAGCA GGGCGAGGAG ACCCAGGCGC TGGTGAAGGA CCTGGAGGGC
GCGCGCTACC TGGTCGCGTC GGTGGACCGC AAGGAGCGCA AGCGCAACCC GCCGCCGCCC
TTCACCACCG CGAAGCTGCA GCAGGAGGCG GCGAACCGCC TCGGCTTCAG CCCGAAGAAG
ACCATGACGC TCGCGCAGAA GCTCTACGAG GGCGTCGAGC TCGGCGACGA GGGGGCCATC
GGCCTCATCA CGTACATGCG CACCGACTCG GTGCGGCTCG CCACCGAGGC GGTGGACGCG
GTGCGCGCCC ACATCCAGCA GGCGTACGGG ACGGACCACC TGCCGGAGCA GGCCAACGTC
TACAAGACGA AGGCGAAGGC CGCCCAGGAG GCGCACGAGG CGGTGCGCCC CACCTCGATG
GACTGGACGC CGGACCGCGT GGCGCCGTTC TTCGACCAGA TGGGCGAGCG CGACATGTAC
CGGCTCTACG AGCTCATCTG GAACCGGTTC GTGGCGTGCC AGATGGTGCC GGCGATCTAC
GACCAGACCT CGGCCGACAT CGCCGCCGGC CGCGCGGTGT TCCGGGCCAC CGGGTCGATC
CTCAAGTTCC CCGGCTACCT CGCCGTCTAC GGGGCGAAGC CGCCCGAGGA GGAGGCCGGG
GCCGAGGAGG AGAAGACGAA CGGCGACGCC GCCGAGCCGG TGGCCCGCGC CGAGGACCGC
CAGCTCCCGC CGCTCGAGGC CGGGATGGAG CTGCGCCTGC TGAAGCTGCT GCCCGAGCAG
CACTTCACGC AGCCGCCGCC GCGGTTCAAC GAGTCGTCGC TGGTGAAGGA GATGGAGGAG
CGCGGCATCG GCCGGCCCTC CACGTACGCG GCCATCCTCG ACACGATCCA GGAGAAGGGC
TACGTCGAGA AGCTCGAGAA GCAGTTCAAG CCGACCCACC TCGGCGTCCT GGTGACCGAC
GAGCTGGTGC GGGCGTTCCC GCGCGAGATG GACATCGCGT TCACCGCCGG GATGGAGGAG
AAGCTCGACG GCATCGAGGA GGGCGCCGCC GGCTGGCAGC AGGTGCTGGA GGAGTTCTAC
TCGAAGTTCA AGGAGGACCT CGCCAAGGCG GACGAGGCCA TGCGCAACGT GAAGGCGCAG
GCCATCGAGA CCGACATCAC CTGCGAGAAG TGCGGCCAGC ACAAGATGGT CATCAAGTGG
GGCCGCAACG GCGAGTTCCT CGCCTGCCCC GGGTACCCGG AGTGCCGGAA CACCATGAAC
TTCCGGCGCG AGGACGGGAA CATCGTCCCG GAGAAGGAGG AGGACGTTCC GGTCGAGGAC
AAGTGCCCGG AGTGCGGCGC GGACATGGTG ATGAAGCGCG GCCGCTTCGG CCGGTTCCTC
GCCTGCACGC GCTACCCGGA CTGCAAGGGC ACCAAGCCCG TCTCGATCGG CGTGACCTGC
CCGAAGGGCT GCGGCGGCTA CATCAGCGAG AAGCGCTCCC GCCGCGGCAA GACGTTCTAC
GGCTGCTCGT CGTATCCCAA GTGCGACTTC GTGGCCTGGG ACCGCCCGCG CAACGAGACC
TGCCCGCAGT GCGGCAGCGC CTACCTGCTG GACAAGTACT CGAAGAAGAC CGGCCCGTTC
GTCGCGTGCC CGAACAAGGA GTGCGGCTAC CGGCGCGAGG CCGAGCCGCG CGAGGGCGGC
GCGGAGGCGG CCCGGGCGGA GCCGGTCAAG GCGTAG
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| Protein sequence | MAREPKTGAV AVKKKKAAAA PKEATAVAEA EAPKTPRRPA RKTSTGTSLV VVESPAKAKT
IKKYLGRSFD VKASVGHVKD LPKSKIGVDV EKGFLPEYDV IKGKAKVLSE IKRAARTADH
VFLATDPDRE GEAIAWHISE ELGAEGGDAR VRRVLFNEIT KTAIQKAIEK PLDLDRKKFD
SQQARRILDR LVGYQISPIL WKKVRRGLSA GRVQSVAVRL VVEREREIEA FVPVEYWSLD
ADLAARVPPD FRAKIFKVDG QKADLKQGEE TQALVKDLEG ARYLVASVDR KERKRNPPPP
FTTAKLQQEA ANRLGFSPKK TMTLAQKLYE GVELGDEGAI GLITYMRTDS VRLATEAVDA
VRAHIQQAYG TDHLPEQANV YKTKAKAAQE AHEAVRPTSM DWTPDRVAPF FDQMGERDMY
RLYELIWNRF VACQMVPAIY DQTSADIAAG RAVFRATGSI LKFPGYLAVY GAKPPEEEAG
AEEEKTNGDA AEPVARAEDR QLPPLEAGME LRLLKLLPEQ HFTQPPPRFN ESSLVKEMEE
RGIGRPSTYA AILDTIQEKG YVEKLEKQFK PTHLGVLVTD ELVRAFPREM DIAFTAGMEE
KLDGIEEGAA GWQQVLEEFY SKFKEDLAKA DEAMRNVKAQ AIETDITCEK CGQHKMVIKW
GRNGEFLACP GYPECRNTMN FRREDGNIVP EKEEDVPVED KCPECGADMV MKRGRFGRFL
ACTRYPDCKG TKPVSIGVTC PKGCGGYISE KRSRRGKTFY GCSSYPKCDF VAWDRPRNET
CPQCGSAYLL DKYSKKTGPF VACPNKECGY RREAEPREGG AEAARAEPVK A
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